AMCG00014355


Basic Information

Item Value
gene id AMCG00014355
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10766636 ~ 10801310 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014355
ATGGTGGAGGTGCTCTTTCAACACGAGCGGGCCGAATGCGTGCAAGAGGGAGTCACTATGGAAACACTACATTCTCCAGGCAACCAGTCACCAgtcctggattttttttttcagAAACCCCACGGCCTGTTGTCAGTGCTGGATGAAGAGAGCCAGGCGCTGCGCCCTGCTGAACAGAACCTGTACAAGAAGCTGCAGTCTCAGATTGAGACATCCAACGTGAACGCTGTGTACCTGTCTACTAAAGATGGGAATGGCAACCCAGCACCAAAGGATCAAGGCCCCTCGTTCACTGTCATGCATTATGCAGGGAGGATGTCATATGACCTCACAGGAGCCCTAGAAAAGAACAAGGATTCCCTTCCACAGAATATCCTTTTTCTGATGAAATCCAGTGAGAATGTGTTCATCCATCAACTGTTCCAGTCCAAGCTGACACAAACAGGCTCCCTTGTTCCTCCCTACCATCGCCTTAAGCTCAGAGGACCCAAATCTGCTCTGCTTATTCAGAAAATGACATCACCTTCCACAGCCCGAGAACCAAAGAAATATCTGGACCTCAGTAAGcTTATGAAGAAAAAAGGGGCAACTTCATTTCTTCAGAGGCTTGAACGCTGTGGACCAGTTACTGTGGCTGTTCAActcaggAATTCACTTGCTGATATTACTAGTAAGCTGCAGAACTGCACTCCACATTTTGTACAGTGTATAAAACCCAACAACTCCAGGCAGCCAGATGTGTTTGACAATTTCTATGTGTCCACTCAACTCAAATACATCGGGGTGTTGGAGATGGTGAAGATGATCCGCTATGGCTACCCTCTGAGGCTCTCCTTTTCTAGTTTCCTAGCAAGATATAAGGATTTAGCTGACATGGTACTTGGCGACAAGAGAAAGTTGTCATCTGAAGACAAGTGTCGCCACATTCTCCAGCACTGCAAGCTCCAAGGGTGGCAGATGGGGCACAGCAAGGTGTTCCTGAAGTACTGGCAAGCTGACCATCTTAACGATCTCTGCCTCCAGCTCCAGAGGAAAATTATAACCTGTCAAAAAGTTGTGAGAGGGTTCCTCGCACGCCAAAGGCTCCGGCGCAAAATGAGCATCAGACAGCAAGAGGTCAGCTCTGTGCAAGGCTTCCTACAGGACGTGGAAGATATGGGTCTGAAGGCATACGATGGCTTGGTGATCCAGAACGCCTCCGACATTGCTCGGGAGAATGACCGCCTGCGCAACGAGGTGAACGGGATACAGCTGAACGAAAAGCTGGACAACACGGCAAAGGAAGAGGAAGGAGTGAAAAGAGCCGGAGACAAGTGCGGAAAGGTCAGTGAAGGGAGCTCTGAGGGATGCCGGACACCAAAGCACTTTCATTCCAGTTCTGTGCCCATCCCCATGGCCGTGGACAGCTTGGTACATTCCGCCGCCGGGTCATCAATCAAATCCCCCTCCCTGCAATCAGTGTTCAGCATGGATGACAGCAGCTGCCTCCCGTCACCACGGAAACAGCCTCCTCCCAAACCAAAGAGGGACCCCAACACCAGACTCAGTGCTTCGTATGAAGCCGTTAGTGCCTGCCTGGCAGCTGCCTCTAAGGAAACATCAAGTGAAGCTCTTTCAAAACCAAGACCTCATAGTGATGACTACAGCACAATGAAGAAGATTCCTCCTCCAAAGCCAAAAAGAAGCCCCAACACAAAACTGAGTGGTTCCTATGAGGAGATTTCAGTTCGCAAACCTACAGAAATTAAGCTGTCTTGCTTTACTAAGGGAGGACAATGTCTGGGAATGATCCAAAGGGCAGCATCTGCTGACGGCCCACAATACGGTGTGCTCAGTCTTTATCATTcccaagaggaggaggaagctgTCTACATCGAAATGATTGGAAATGCTCGAGCCATGAGTCTACCTGAGGTGGACGCCCCAGACCAGGGGGAGTCTGTCTATGAGGAAATGAAGTATTTTCTGCCTGAAGATGGCACAACGGCTAAAATACTGCTTTCAAAACCAGAAAGGTCTCCTCAGCAACTATATGAGACAAAAAAGCTAGTAATAGTGGAGCATTTTCATCCAGGTCATGGAGGAAAGACATATTGCAAAGATGGCACCTGTGACATTCCCCCTCCATTCCCCAATCTGCTCCCTCACCGGCCACCTCTGTTAGTTTTCCCCCCAACCCCCGTCACTTGTTCTCCCGCTTCAGACGAATCCCCTCTAACACCCCTGGAGGTGAAGAAGCTACCTGTCCTGGAGACCAACCTGAACTATCCGGGGCAGTCAGAAGGCAACAGCCCCCTATCTCCTCAGTGCGCACGACACCAGAAACCAGACAGCGAGAGACCCTCGTCACCCAGTCTCTCAGTGTTCAATATGGCGGACAAATCTACTCCACCCCCTAcacctcctcctccgcctcttctgcctcctcctccagcaATGCCCCCCCCTTACCGACCTCCATCGCACTTCCCTTTCCCACCTGAGGCCAGTGTTTTGGCCTTGGCCAGAGCAGCATCGGTCTCCAACTCAGATTGTCCGAAGGTCCCTCAGAAGCTGGGCCACAGTCTCTCAGACGCGCCCTCGGGctgcaacaaacctccgtacTCCCCGGTAAAGACCCAGAGGACGGAGCCCAGGAAGTCACACTCCTGCTCCTCATCCCCCCTCCCATTTAACCCTGCTAATGCCAGGTCCCTGACCAGCCCCCTCGATGAACTGACCACACTCTTCAGCTCGGGACGAAGCCTCCTGAGAAAGTCCGCAGCTGGACGGAAAATAAGGGAACCTGAAAGATTCAACTCCAACATTATCATGCCCGGCCGAGAGGAGCCCAGTGACACGTCACCTCAACTCCAAGATAAAAACGCCAATAACCGCGTGAATACCCCGTCATCAACTGCACCCAGTCCTGCATCTATAGAGAATGGAAATCAGCTCTCAAAC

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K17481 MYO16; myosin XVI

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014355 True 2943 mRNA 0.51 12 10766636 10801310

Neighbor

gene id symbol gene type direction distance location
AMCG00014356 NA coding upstream 12489 10721084 ~ 10754147 (+)
AMCG00014357 NA coding upstream 94898 10665393 ~ 10671738 (+)
AMCG00014350 NA coding upstream 386215 10352845 ~ 10380421 (+)
AMCG00014351 LOC107688773,LOC102224404,LOC106959393,LOC103459619,LOC108266990,LOC107099852 coding upstream 448634 10308422 ~ 10318002 (+)
AMCG00014352 NA coding upstream 524375 10229000 ~ 10242261 (+)
AMCG00014362 NA coding downstream 260285 11061595 ~ 11086602 (+)
AMCG00014363 LOC106582132 coding downstream 296257 11097567 ~ 11105850 (+)
AMCG00014361 NA coding downstream 324089 11125399 ~ 11129360 (+)
AMCG00014369 arhgef7a,LOC107668898,LOC107712280,LOC107569023 coding downstream 376651 11177961 ~ 11220774 (+)
AMCG00014370 sox1a,LOC105893305,LOC106586732,LOC101064967,LOC107692134,LOC107718482 coding downstream 591079 11392389 ~ 11393405 (+)
G69499 NA non-coding upstream 273240 10493147 ~ 10493396 (+)
G69457 NA non-coding upstream 542601 10223671 ~ 10224035 (+)
G69431 NA non-coding upstream 710903 10055377 ~ 10055733 (+)
G69428 NA non-coding upstream 711925 10054491 ~ 10054711 (+)
G69400 NA non-coding upstream 738285 9974424 ~ 10028351 (+)
G69540 NA non-coding downstream 35894 10837204 ~ 10838230 (+)
G69556 NA non-coding downstream 158016 10959326 ~ 10961929 (+)
G69610 NA non-coding downstream 419760 11221070 ~ 11221274 (+)
G69681 NA non-coding downstream 839773 11641083 ~ 11641452 (+)
G69722 NA non-coding downstream 918008 11719318 ~ 11722767 (+)
AMCG00014345 NA other upstream 614723 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 757988 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 3284076 7464503 ~ 7482560 (+)
G68848 NA other upstream 3350042 7413640 ~ 7416594 (+)
G68830 NA other upstream 3417169 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 2444999 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 2853928 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 3388254 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 3501137 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 4420604 15221914 ~ 15242333 (+)

Expression


Co-expression Network