AMCG00014356


Basic Information

Item Value
gene id AMCG00014356
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10721084 ~ 10754147 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014356
CTAAGGCTGCTGAAGGATGGTGCTGACCCCAATACACTAATTTCTTCAGGAGGATCCCTGCTCCATCTGTGTGCGCGCTATGATAATGCCTTTGCCGCAGAGATTCTGATTGAGAGGGGGATGAACGTCAACCAGCAGGACGAGGATTTCTGGACTGCGCTGCATGTGGCGTGTGCCTGTGACAATGCCGATATTGTTCTTCTTCTGTTGCTGGCCGGGGCCAATGTGTTGCTGCAAGATGTCAATGGGAACATTCCTTTAGATTACGCGATGGAAGGGACAGAGACAAGCTACATTCTTTTGAGGCATCTGGAAGAAAATGGTGTGGATGTCAACTCCATGCATCATATGAAAACACAGCGGCCTCTGACCATGTTGTCAGATGTCAAGCATCTCATAGCAGCTGGAGGAAGTGTGAACCAGAGCAATGAAGAAGGGGTGACATTGttaCATATGGCCTGTGCCAGTGGCTACAAGGATGTGGTTTCTCTATTGCTAGAGAATGGAGCTGACCCTCAAGTGGCTGATAATAGCTATTGGACACCTCTACACCTGGCAGCAAAATACGGACAGGCAGAGGCTACCTGGGAGGAAAGGCTGAGGGACCCATCCTCTCTCTCATTACCAGCAGAGGAAGCGTGTGAAGAAAACAGCCATGATGTGTCCATGCAAGTGAAGAAACTGAATCCTCTTACCCTCTCCATCTCCAAGCAGGACAGCCTTCTTGAAAAAAATGCCATGTTCAGAGACACAACTGGTGCCCCGTCATGCCAGCCGTCTCAAGACAATGGGCGTGACAGCAATTTCATTAGTGGCTCTAGCAAACTTGAACAGATAAAACTAATGCCTCCTGCACCGAATGATGATTTGGCTTCCCTGAATGAACTGACTGAAAGTAGCCTACTGTATGAAATGCATAAACGCTTTGGAAATGATCAGATCTATACCTATATTGGAAATATTCTTTTGCTGGTCAATCCAAATAAGGAGCTTCCTATATATTCAACACTGGTTAGCCAGCTTTATCTGAGCTCCAGTGGGAGGCTGTGTTCGTCCCTCCCTCCGCACATCTTCTCCTCAGCTGAGAGAGCATATCACATGATGGTTCAAGAGAGGCGGCCCCAGTGCTTTATCCTCAGTGGAGAAAGTGGTTCTGGGAAGACTGAGGCCTGCAGGCACATAGTGAAGCACCTGGCTTCACGCTCAAGTACGAGAGGAAACTCATTGGAACCTAAAATTAGACATTACCTTACACTGCAATACTGTGAGAAGAAAAAGTCTTTAATCAGAGcTAGAGTTTATACATATCTTTTGGAAAGGTCCCGGCTCATTTCACCACCACCTCATCAATTcaactttaatatattttacctgATGGCTGATGGGATGTCCAGTGAAGAGAAGTGTGGCCTTTATCTCAACAATTTCCTCGCACACAGGTTCTTGAGCCAGAATATACCAGAAGAGAGAGGAGCAGCAACAAACATGCAGAACAGAGACAAGTTTGCTGCCCTAAAACAAGCCCTGAGGGCCCTGGGCTTCAACAACCTGgaGGTGGAAAACCTGTTTGTGATTCTTTCTGCCATCCTTCACCTCGGAGACATACGGTTTACAACACTGACAGATGCTGAGACAGCGTTTGTGTCAGACCTGCAGTTGCTAGAACAAGttgCTGGAATGCTGCAAATTTCATATGACGAACTTGGATCTGCATTAACGTCTGATGTCCAATACTTCAAAGGTGATGTGATAATGAGAAGACATACAGCTGAAATGGCAAATCATTACAGGGACCTTCTTGCAAAGTCCATGTATAACCGTCTCTTCAGCTTTTTAGTGAACAGCATCAACTATTACCTCGAGGGCCAGGAAGACAGCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014356 True 1881 mRNA 0.46 17 10721084 10754147

Neighbor

gene id symbol gene type direction distance location
AMCG00014357 NA coding upstream 49346 10665393 ~ 10671738 (+)
AMCG00014350 NA coding upstream 340663 10352845 ~ 10380421 (+)
AMCG00014351 LOC107688773,LOC102224404,LOC106959393,LOC103459619,LOC108266990,LOC107099852 coding upstream 403082 10308422 ~ 10318002 (+)
AMCG00014352 NA coding upstream 478823 10229000 ~ 10242261 (+)
AMCG00014344 NA coding upstream 558919 10156465 ~ 10162165 (+)
AMCG00014355 NA coding downstream 12489 10766636 ~ 10801310 (+)
AMCG00014362 NA coding downstream 307448 11061595 ~ 11086602 (+)
AMCG00014363 LOC106582132 coding downstream 343420 11097567 ~ 11105850 (+)
AMCG00014361 NA coding downstream 371252 11125399 ~ 11129360 (+)
AMCG00014369 arhgef7a,LOC107668898,LOC107712280,LOC107569023 coding downstream 423814 11177961 ~ 11220774 (+)
G69499 NA non-coding upstream 227688 10493147 ~ 10493396 (+)
G69457 NA non-coding upstream 497049 10223671 ~ 10224035 (+)
G69431 NA non-coding upstream 665351 10055377 ~ 10055733 (+)
G69428 NA non-coding upstream 666373 10054491 ~ 10054711 (+)
G69400 NA non-coding upstream 692733 9974424 ~ 10028351 (+)
G69540 NA non-coding downstream 83057 10837204 ~ 10838230 (+)
G69556 NA non-coding downstream 205179 10959326 ~ 10961929 (+)
G69610 NA non-coding downstream 466923 11221070 ~ 11221274 (+)
G69681 NA non-coding downstream 886936 11641083 ~ 11641452 (+)
G69722 NA non-coding downstream 965171 11719318 ~ 11722767 (+)
AMCG00014345 NA other upstream 569171 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 712436 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 3238524 7464503 ~ 7482560 (+)
G68848 NA other upstream 3304490 7413640 ~ 7416594 (+)
G68830 NA other upstream 3371617 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 2492162 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 2901091 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 3435417 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 3548300 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 4467767 15221914 ~ 15242333 (+)

Expression


Co-expression Network