AMCG00014357


Basic Information

Item Value
gene id AMCG00014357
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10665393 ~ 10671738 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014357
CATACAGTTAGCAGAATAATGAACGGCAGCAGTACAGATCCACAGgattttgtaatattgtttcTGAGAACTCAGCCAAAACAATGAATCCTGCTGAGCGAACACTTCGCAGTGACTTTGACAATCAGCAAAAGTGCCTGATGTCCACAATATTTATTCTTACTCTTGCTGCAATAATGTCTTCATTAATGTCAGCTGTCTCTCTTTATCACATCATGACATTAAAAGCAGAAGTTGCCTGTCTAAAGACAGAGCTTTTCAAAAAGCGAGAAGAGCAAGTGACTTCCTTAACCCACCGTGACAGAGAAATAGCTCATCCATCTGATATCAAACATCAGAAAATGCAGTTCTTAAATGACGAAGATGTAAACAAGCCCAGCACGGAGAATCCAAAGACACAGCAGAAGCAACACAGGATAAAGCGTGGCAGTCCTGATAATGTAACCGtgtttcagcCCTGTTTGCAAATGATTGCAGATAAGAAAAGAAACAGCACCAAAAAAGGAATTGTAAAACTCGAAGAAGGTGACAACATTGAGCTCCTGATACCCCGAAATGAGGCGAATGTGTCTATGGAAGGAGATTCGACATTCTTTGGTGCAATCAAACTTGTCTGAGTGGTGTGTATACGGCTTGGATATCTGCCATTTTGAGTTCTGGGGAAACCAGATGAGATTGTGCACAGTTCTAAATCTGTAGACATGTTTTGGTGAAGTAATGTCTGCTCAGCTTGTTGTGATACAAACAGGAAGCCCAGTGAATGCGTTAGCACTTCTGccgtttgattttctttcttttttttaagtaaaatatagaATCTTGGCCATTCCAGTCAGCTTTTCAAAGACCAATGAAACAGATGTTCATGTCTCTGGGGTTTGAGAATGTCCCAATGTCTGGatattttttctaaaagaaGATGCGGTTATTCAATGCGAGACACTTCTTCACTTCAATAGGGTGAAATCCACTCAGAAGTCAGAATggagtttaaatgtaataaataaaggcaTTCAGGACGTGAACGATTTATACATCCTATATGAACTGTGAAGGTGACCTAAAAGGACTTTAATACACTTTAAGAAAAAAGGACCATGaatgataaatgtaaaaaactcTGCTACATGTGTTTCTAGCTAAATTACATGATCTTCACCAGTTTACTGCAAATTCAGCTTCAAAGtattcattttatcatttttaatttactgttattctcaatgtataaaatatatatatttttaaatctgatgtatttattaattgagaTGTGAAACAAGTAATTTCAAtgttataaagcaaacaaacaaataaacaacaattgaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014357 True 1332 mRNA 0.37 4 10665393 10671738

Neighbor

gene id symbol gene type direction distance location
AMCG00014350 NA coding upstream 284972 10352845 ~ 10380421 (+)
AMCG00014351 LOC107688773,LOC102224404,LOC106959393,LOC103459619,LOC108266990,LOC107099852 coding upstream 347391 10308422 ~ 10318002 (+)
AMCG00014352 NA coding upstream 423132 10229000 ~ 10242261 (+)
AMCG00014344 NA coding upstream 503228 10156465 ~ 10162165 (+)
AMCG00014342 nck2b coding upstream 519691 10125154 ~ 10145702 (+)
AMCG00014356 NA coding downstream 49346 10721084 ~ 10754147 (+)
AMCG00014355 NA coding downstream 94898 10766636 ~ 10801310 (+)
AMCG00014362 NA coding downstream 389857 11061595 ~ 11086602 (+)
AMCG00014363 LOC106582132 coding downstream 425829 11097567 ~ 11105850 (+)
AMCG00014361 NA coding downstream 453661 11125399 ~ 11129360 (+)
G69499 NA non-coding upstream 171997 10493147 ~ 10493396 (+)
G69457 NA non-coding upstream 441358 10223671 ~ 10224035 (+)
G69431 NA non-coding upstream 609660 10055377 ~ 10055733 (+)
G69428 NA non-coding upstream 610682 10054491 ~ 10054711 (+)
G69400 NA non-coding upstream 637042 9974424 ~ 10028351 (+)
G69540 NA non-coding downstream 165466 10837204 ~ 10838230 (+)
G69556 NA non-coding downstream 287588 10959326 ~ 10961929 (+)
G69610 NA non-coding downstream 549332 11221070 ~ 11221274 (+)
G69681 NA non-coding downstream 969345 11641083 ~ 11641452 (+)
G69722 NA non-coding downstream 1047580 11719318 ~ 11722767 (+)
AMCG00014345 NA other upstream 513480 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 656745 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 3182833 7464503 ~ 7482560 (+)
G68848 NA other upstream 3248799 7413640 ~ 7416594 (+)
G68830 NA other upstream 3315926 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 2574571 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 2983500 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 3517826 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 3630709 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 4550176 15221914 ~ 15242333 (+)

Expression


Co-expression Network