AMCG00014358


Basic Information

Item Value
gene id AMCG00014358
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10900008 ~ 10903196 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014358
ATGGCGAGTCCGCCAGCCCTGGGAGGACACTTATTTACCATTAATAGCGACCACGTTAAGAAAAGCGGCTACCTGAAGAAGCAGAAGCACGGCCACAAGAGGTTTTTCGTGTTGAAGGGGCACGGCGAGCGCTGCCCTGCCCGGCTGGAGTACTACGAGAACgagaagaaatggaaaaacaagtcGGCGGCGAAGAGGGTGATACCCCTGGACTCCTGTCTGAACATCAACAAGAGGGCAGACGCCAAACACAAACACCTGATCGCCCTGTACACCAAGGACGAGTATTTCGCCGTGGCTGCCGAAAAcgagcaggagcaggagaacTGGTACAGGGTGCTGGCCGATTTAATGAATGAGGGGAAAGTGTGTGACGGGTCGGCTTCTGCTTCTGCCTCCTCGCTGGTGGGGTTTGAAGAGGCCAACTACGGGCTGATCACGCCGGCGAGCGCAGTTTACAGGGAGGTATGGCAAGTTAATCTGAAATCCAAAGGACTGGGGCAAAGTAAGAATCTGACGGGGGTTTACCGGCTGTGTCTGTCCAGCCGCACCATTAGCTTCGTCAAACTGAACTCGGAGGTCCCCTCTGTCAGCCTGCAGCTCATGAATATTCGCAGATGCGGGCACTCGGACAATTTCTTCTTCATTGAAGTGGGCAGGTCCGCCTCCACAGGGCCGGGGGAGCTGTGGATGCAGGCGGACGACTCTGTGGTGGCCCAGAACATCCATGAGACCATTCTGGAAGCGATGAAAGCCATGAAAGAGCTCTCTGAATTCAGACCTCGGAGTAAAAGCCAGTCCTCGGGCACAAACCCTATTTCCGTGCCCACGCGGCGGCACCTGAACAACCTGCCTCCCAGTCAgactgggctgcccaggagatCCAGGACAGACAGCATGGCAGCCACGTCTCCTGCCAACAAATTCAGCTCCTGTCGCATTCGGACGGCAAGTGAGGGAGATGGCACAATGTCCAGACCGGTTTCTGTAAACGGGAGCCCCATCAGCCCCAGTGCTATTCGAACGCACCTGAGCCGTTCTAATACAGTCAACACCCGGCCATCGAGAGTGTTTCACACCTCCTCACTTCAACACAGCAAATCAATGTCTATGCCAGTGTCTCATTCTCCGCCTTCAGCAACCAGCCCTGTGAGTTTGTCTTCGAGCAGTGGGCATGGCTCGGCTTCAGAAGCCATTCAGCGGCCATCTAGTGAAAGTGCCTCCGTGTCAGGATCACCGAGTGATGGTGGCTTCATGTCTTTTGATGACTACGGGTCTAGCCCAGGGGATTTAAGACACTACCTGGGAAACAGGAGCAACACCCCAGAATCAATTGCGGACACACCCCCTTTTCGTGAGGGCAGTGATTTGTATGGTTACATGACCATGGAGAGGCCAGCCAGCAATCTCTTTAACCAAAATAACCGACGAACAGCCAGAGATGAGGCCTTGGATTCTGAAAAGGCATACAGAAAGAGAACCTACTCGCTCACAACACCACCCCAGCAGCGAGCGGCATCACAGGTCTCTTCTGCCTCACTGGATGAGTACACTTTGATGAGAGCCACGTACACGAATGGCAACTCTGGGCGCAATTCCTACACAGCCTCTCCCAAAGTGACGTACACCCCATATCCAGAAGATTACGGGGACATCGAAATTGGGCCCCTCAAAAGCTCAAGCAACAATTTGGGTGATGATGGATACATGCCCATGACACCTGGTGTGGCCCCACAAGCCAGCAAAAACTACATGCCAATGAGTCCTACAAGTGTCTCTGCCCCTAAGCAAATTATCAATCCAAGATCTCATCCCCAAGTGAATGGGAACGGATACAGAGCAAATTCACCCAGCAGCTGCTCACTTGATGACAACGGTTATATGAGAATGTGGTGTGGCTCCAAGTTATCTGTGGAGAGCACTGACGGAAAGCTAACAAATGGAGACTACATGAACATGTCACCCATTGACCACTGTGTCTCACTGACGCCCCCTGATTACTTCCTCAGCTCTCTGAATAGTGACATCTCGAGACCCTCCTACTCTTTCAATTCACTGCCTCGGTCTTACAAACCACAGGCCCCCAAAAATGGGGACAGTGACCAGTATGTTATGATGAACTTACAGAATCAAAAGATTCTTGAAGAGTCAAATTACTGTACTGCATCTGCTCACCCTGCTGTAACAAACCACTTAGCACCATCTCCAGtgagacaaaacagaaatgaaaacttGGTACATAGGGGGAGAGCCAACAGACCAACCAGATTGTCGCTGGACACTTTAAGGACTTTGCCCAGTATGAACGAGCACCCTTTACCTGCTGAGCCCAAAAGTCCTGGTGAGTatattaacattgatttcagTGAAACTACAAGGTACTCCCCGCCGTCTCTGTCTACAGAGAGTCCAGCGTCTTCACTGGGATCCACAAATGGCCAAAGAAGATCCCCCCTGTCAGATTACATGAACATTGACCTCAACGCTCAGTCTCCTAATTTAGTGGAGGCCCCTGCTAATGCTATGAATGTAATATCGACATTGTCAGGCTCTTGCCAACCAGATGACCAGTACCTCAAAACGCAGATCGGCTCTTTATGCATTTCCAGCTCGGCAAAAGACGATTATACAGAAATGACATTTGACATTGCAAATACCCCTCCCCAGCCCatttcacaaaaaaatgaaattgttcaAACTACAAGCCCCACCAATGGGGTGAAGAGATTAACCCTCATGGATAAAGTGTCAGTGGTGGAGGCATTCTTGCTGCCCAGTACCCCTCCAGACCCGGACAGGGGGGCAAAAGTGATCCGCGCGGACCCCCAGGGACGTAGGCGGCACAGCTCGGAGACATTCTCATCCACCACCACCGTAACACCTGTCTTTCCTTCTTTTGCCCATGATCCCAAGAGACACAGCTCTGCTTCCGTAGAAAATGTTTCTCTCAGGAAAAGCGAGGGCTCTGATGAAGAATATGGCAGCCCTATGTGTCGGGAGACCTCCGCCGGATTTCAAAATGGACTGAATTACATTGCCTTAGACCTGGATGAAAATTTGGGGAACTGTGAAAACCTTGTAAGACTTAAAACAAcgaattatttaaaatctggTATCAATGGAGTAGATGCCAGCCCATATGTCAGCCTCAGCTTCTTAAAGGAAACAGCCACTGCTGTTAAAGGTtag

Function

GO: NA

KEGG:

id description
K16172 IRS1; insulin receptor substrate 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014358 True 3189 mRNA 0.51 1 10900008 10903196

Neighbor

gene id symbol gene type direction distance location
AMCG00014353 NA coding downstream 191990 10652279 ~ 10708018 (-)
AMCG00014354 NA coding downstream 373039 10525613 ~ 10526969 (-)
AMCG00014347 NA coding downstream 571777 10318244 ~ 10328231 (-)
AMCG00014349 NA coding downstream 598647 10300003 ~ 10301361 (-)
AMCG00014348 NA coding downstream 643633 10241006 ~ 10256375 (-)
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding upstream 58053 10961249 ~ 10974117 (-)
AMCG00014360 NA coding upstream 71269 10974465 ~ 10991144 (-)
AMCG00014364 NA coding upstream 185551 11088747 ~ 11096433 (-)
AMCG00014368 NA coding upstream 201782 11104978 ~ 11121831 (-)
AMCG00014366 NA coding upstream 236256 11139452 ~ 11144825 (-)
G69539 NA non-coding downstream 78936 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 103819 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 106862 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 122567 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 126586 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 866494 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 975901 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 2067057 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 2182167 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 2398728 13301924 ~ 13302379 (-)
G69537 NA other downstream 101861 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 838778 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 882257 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 1582841 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 2515784 8383285 ~ 8384224 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 221833 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 756815 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 2184412 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 5818877 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 6543672 17446868 ~ 17462290 (-)

Expression


Co-expression Network