AMCG00014360


Basic Information

Item Value
gene id AMCG00014360
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10974465 ~ 10991144 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014360
ATGGTGAACCAGGAACTCCAGGACTTAAAGGAATGCGTGGTTCATCAGGTTTACCAGGATTTCCAGGAAACCCAGGCCTTCCAGGTATCCCAGGACAAGACGGTCCTCCTGGTTCACCAGGAATCCCAGGGTGCAATGGGACAAAGggTGAACGAGGCTTTGATGGAATCCCTGGCATTCCAGGACTTCTGGGACCCCCTGGAGAACGTGGCCCCCCGGGCCCTCCAGGACCAAAGGGTAATACCGGCCTACCCGGTCTCAGTCTCCAGGGACCCCCAGGTAATCCAGGGTATCCAGGAGAGTCTGGTCAGAAGGGTGATCAAGGGGCTCCTGGGCTGTCACTGCCCGGTGAGAGAGGTCAGGACGGGCTCCCCGGCTTTCCAGGTCCCCCGGGGCCTCCAGGTGTTGGGCCATGTAATATTTCACAAGGCCCCCCAGGTCCTCCCGGCTCACCAGGATTTCAAGGAGAGTCAGGACAGAAAGGGGACAAAGGAGATACCTGTATCCACTGTGAAGCCTTTGGGCCACCCGGACTTCCTGGACCCATGGGTCCTACAGGACAGCAAGGGTATCAACGGAGCACCAGGCCTGATAGGAAATCCAGGTGCACACGGGGAACCAGGGGATGTCTTCTTTGCACCTGGCCTGAAAGGGGACAAGGGCAGCCCAGGCATCAAGGGTACTCCTGGAATTCCAGGATTAGATGGATTTCCAGGGCATAATGGCACTCGTGGACCCCCTGGCCCCAGAGGACTACCAGCAAATGAGGGTAACAAAGGAGACCAAGGAAGGGATGGGGACCCAGGTCTGCCAGGGCCCCATGGGGACAGGGGACCTCCTGGAATCCCAGGGTACGGCCGTCCAGGTGAACCCGGAGAGAAGGGAAACCAGGGAGTCCCAGGAAACCCAGGAGCTCCTGGTTTTGCAGGAGCTAAGGGTGAACGTGGCCAAATACTGAGTGTCCCTGGGCCGGCAGGCAGTCCTGGACCACAGGGACCCACTGGGAGACCAGGAATTCAAGGCAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014360 True 1029 mRNA 0.59 12 10974465 10991144

Neighbor

gene id symbol gene type direction distance location
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding downstream 348 10961249 ~ 10974117 (-)
AMCG00014358 NA coding downstream 71269 10900008 ~ 10903196 (-)
AMCG00014353 NA coding downstream 266447 10652279 ~ 10708018 (-)
AMCG00014354 NA coding downstream 447496 10525613 ~ 10526969 (-)
AMCG00014347 NA coding downstream 646234 10318244 ~ 10328231 (-)
AMCG00014364 NA coding upstream 97603 11088747 ~ 11096433 (-)
AMCG00014368 NA coding upstream 113834 11104978 ~ 11121831 (-)
AMCG00014366 NA coding upstream 148308 11139452 ~ 11144825 (-)
AMCG00014367 ankrd10,LOC106586677 coding upstream 176496 11167640 ~ 11175442 (-)
AMCG00014372 atp11a,LOC106575518 coding upstream 468469 11459613 ~ 11502601 (-)
G69539 NA non-coding downstream 153393 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 178276 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 181319 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 197024 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 201043 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 778546 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 887953 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 1979109 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 2094219 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 2310780 13301924 ~ 13302379 (-)
G69537 NA other downstream 176318 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 913235 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 956714 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 1657298 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 2590241 8383285 ~ 8384224 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 133885 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 668867 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 2096464 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 5730929 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 6455724 17446868 ~ 17462290 (-)

Expression


Co-expression Network