AMCG00014364


Basic Information

Item Value
gene id AMCG00014364
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11088747 ~ 11096433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014364
GTTGCGGGACTCCGCGGGTGTTACTTGTTTCATATCCTCTCCATATGTCAACACAACAGCGCTATAAAAGTGCAGCAGGCCACATgctacactacagcacagacGCAAACCGCCCGCCTTTTTAACTGAAGGGAACTATGGTAGCCACTGAAACGGAGCTTGAGTGGTGAATTAGTTTGTTGTCCTTGCCTGAATGTGCGACAATGACGAAGCCCGACGTGAAGCTGGTGATCTTGGGCGACATCCACGTCGGGAAGACCTCCCTGCTGCACCGGTACACCGAGAGGCGCTTTAAAGAGACGGTCAGCACGGTCGGAGGGGCTTTCTTCCTGAAACAGTGGGGCCGGTACAACATCTCCATCTGGGACACGGCAGGGCGGGAGCAGTTCCACGGGCTGGGCTCCATGTACTGTAGAGGCGCCGCGGCCGTCATCCTCACTTATGATGTCACTAGCTGGCAGAGCCTGGCTGAGCTGGAGGACAGGTTCTTGTCCCTGACGGACACTGCCAACTCGGACTGCTTTTACGCCATTGTTGGAAACAAAGCTGACCTCACTGACTCTGCAGCCTCTGTGGCAGAAACTGGCGAAGAGCTGGAGAGTAACGGAGACCAGTCTACTACTTGGCGCCAAGTCGCTCCAAAAGCACGCAGGCAAGTACACAGGGATGACGCCATTGGACTTTACCACAGGATCCTGCGCTACAAGATGCTGGACGAGAAAGAGAATCCCCCCGCGGAGAAAATGTGCTTTGAGACGAGCGCCAAGACGGGCTACAATGTGGACTTGCTCTTCGAAACTCTGTTTGAAATGGTGGTACCTGGCATTATCAAAAAGAAAGCTGAAGACTTGTCCAATACTATTGATTTGGAAGAGTGCAATGATGTGAAAAGGACTAAACCAGGCTGCTGCTTTTAAATTGGTAAACATGTAGTTTGTGCATTCCAGTTATTTTAGATCCTGTTTGTTCTAGGAAATCCTTGGCTGCAGTTTTCCAATTGCTGAGTAAGAGGATAAAAGGCTGGGAAGTCTAGAAGTAATTGTGTAGGCTTCAGTGCACATTGCTTATCCAGCAGACTCCGTGTTGTTCCATCACTCCCCCTCACATTTCTGTTGCAAATGTTAACTGTCATGCTAATGAACAATCGAAGCAGAAACAATAGCTATGAGGTTGAAGTTCGAAACGTATTCAAATCTGAAACTCTAATTGAAAGTCAGATGTTTATTAGCACTTCAAGATCAAAGGCATGATCAACAGGATTGAAGCTTAGGTTTAAAAAGTCACTAAACAATGCAATAGAAAGTACTGCTGCTTTATCTGTTAATAAAGATAATGTTAAATTCATAATGATCTACAAAGCACACAACCTAAATGGTCCACTTAAGTCATTTGCAAAATCCTGTTTGAGGAACTTTATGAATTAAACCTAAAAGTATCTACtataatgttattataataatgttatttgaaatgagtatttttactgtgttttgattttgtaagtCTCTTTTCCATTATGCTAaccacatttataaaacaatgtcaATTTTAAAGGACCAGCTATTTTCACACTaattataaaacagaataaaggtGATAACAATCATGTTGCTATGTATTcttctttttaagttttttattcttcttcaatTAAGAATATTAATGTGGGGgctttttctttacatatcCTAGCAGACCCAAGAATTGCATATTCTTAGTGATGGGTGACCTTTCTAACTTTGCAATGATTTGGCAGCTTATTCTTGAATGTAATGGCTGTTCCATAAGAAATTAATTTGAGGCTTCATTAAGG

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K07911 RAB20; Ras-related protein Rab-20

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014364 True 1813 mRNA 0.43 2 11088747 11096433

Neighbor

gene id symbol gene type direction distance location
AMCG00014360 NA coding downstream 97603 10974465 ~ 10991144 (-)
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding downstream 114630 10961249 ~ 10974117 (-)
AMCG00014358 NA coding downstream 185551 10900008 ~ 10903196 (-)
AMCG00014353 NA coding downstream 380729 10652279 ~ 10708018 (-)
AMCG00014354 NA coding downstream 561778 10525613 ~ 10526969 (-)
AMCG00014368 NA coding upstream 8545 11104978 ~ 11121831 (-)
AMCG00014366 NA coding upstream 43019 11139452 ~ 11144825 (-)
AMCG00014367 ankrd10,LOC106586677 coding upstream 71207 11167640 ~ 11175442 (-)
AMCG00014372 atp11a,LOC106575518 coding upstream 363180 11459613 ~ 11502601 (-)
AMCG00014380 rcbtb1 coding upstream 600756 11697189 ~ 11722453 (-)
G69539 NA non-coding downstream 267675 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 292558 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 295601 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 311306 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 315325 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 673257 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 782664 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 1873820 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1988930 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 2205491 13301924 ~ 13302379 (-)
G69537 NA other downstream 290600 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1027517 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1070996 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 1771580 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 2704523 8383285 ~ 8384224 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 28596 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 563578 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1991175 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 5625640 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 6350435 17446868 ~ 17462290 (-)

Expression


Co-expression Network