AMCG00014366


Basic Information

Item Value
gene id AMCG00014366
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11139452 ~ 11144825 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014366
TTAAGAAATGCTAGTGGCCTGACAGCAGCAGATCTTGCACATGCCCAGGGATTCCAGGAGTGTGCAGAACTCCTTTCAAACGTGCAGAACCAGCTCAATCAGCTCAATGGCTTCTGTACCAATGGGGCTTTAAATGGCGTCCAGCAGGCCACCAACACAAGAAGCCACTTCAATGGCGCACCCAATAGAAAGAGATCCCTTGAATATCTGGAGTCTAACCTGGTCAAGAAAGCCAGAACTGATGGCCTGGACATGCCTATGAAGCTGTACAGAAGTGCTGAGGACGAGCTGGAAACCATGCACACTGAGACGGCACCGCAAGTCAGTTCAGGTGCGTCTGTATCCGCAGATTTGAGGAACGGTTGCATGCCAGGAAAGGCTTTGCTGGGCAACGGATTTGCTGTAAATGGGCTTTACCAGCCAGCGCAGCTCAATGGAGTGGAGGCCAAGTCAGTGAATGGCTTCTCTGCCGAATGGGTCCTAGCAGGGTCCCACACCAGTGGAAACGGATTGGCAGTCAGGACCTCAGACCCTGGCACTCTCACTGAAAATGGCTCGAAATCCTCCGATATGTGCGGCTCTCTGCACCTCAGTGGAAGCCCTAGTAGTTGTGTAACACACAGGCCTTCTTGGGCTACAGGTAGCCCCTCGGAGCTGGGCGATCCCGGTGAAAATCTACAGTACGGGCATTACCATGGGTTTGGAGACACGGCTGAGAACATACCTGAGGCTAGCAGCCAAGTGGAGCACACTCGATCAATGAAAGTAGAGCAGCGCTACGATAATGCTGTTTTCAGCACCTTGCACCTCTACCACGGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014366 True 822 mRNA 0.53 3 11139452 11144825

Neighbor

gene id symbol gene type direction distance location
AMCG00014368 NA coding downstream 17621 11104978 ~ 11121831 (-)
AMCG00014364 NA coding downstream 43019 11088747 ~ 11096433 (-)
AMCG00014360 NA coding downstream 148308 10974465 ~ 10991144 (-)
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding downstream 165335 10961249 ~ 10974117 (-)
AMCG00014358 NA coding downstream 236256 10900008 ~ 10903196 (-)
AMCG00014367 ankrd10,LOC106586677 coding upstream 22815 11167640 ~ 11175442 (-)
AMCG00014372 atp11a,LOC106575518 coding upstream 314788 11459613 ~ 11502601 (-)
AMCG00014380 rcbtb1 coding upstream 552364 11697189 ~ 11722453 (-)
AMCG00014379 spryd7,LOC108430519,LOC107600395,LOC108266652 coding upstream 605366 11750191 ~ 11755461 (-)
AMCG00014385 NA coding upstream 721786 11866611 ~ 11867529 (-)
G69539 NA non-coding downstream 318380 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 343263 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 346306 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 362011 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 366030 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 624865 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 734272 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 1825428 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1940538 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 2157099 13301924 ~ 13302379 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 2366 11125029 ~ 11137086 (-)
G69537 NA other downstream 341305 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1078222 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1121701 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 1822285 9305239 ~ 9317167 (-)
AMCG00014374 NA other upstream 515186 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1942783 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 5577248 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 6302043 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 6444442 17589267 ~ 17621151 (-)

Expression


Co-expression Network