AMCG00014367 (ankrd10,LOC106586677)


Basic Information

Item Value
gene id AMCG00014367
gene name ankrd10,LOC106586677
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11167640 ~ 11175442 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014367
ATGTGCAGCGCCGCGTCCTGCAGCCGCATGAGCGCAAACAGCCTCTCCTGCGGGACCTGCAGCGCCACCGGGCGGACTCAAGGGGATATTGCAACCGAAAGCGACCCGCTGTGGCTCGACTCGGTTCATCCCATCGCTTCTGGCTTGAACGCACATTTGAAAGTCCATGCCGGGGTTTCCGTGCGGGATCCGCTCCGGGTTTTGCGGCGGCTGTGGCGGTTCACTGGCGAGCGAGAGCGCCGTCCTTCGTGTGAGCTGCGCAGCGCGGCGTGGCGCCTCAGACAGCCCCCAGAGCCGCACACGACACCGTCCTTTGCGCGAAGCAAAGCGGTCACCCTCGGTGCAGTCGAGAGGACGTCTGGGTCTCCCGGGAACATGTCTGCGGGGTTGGAGTCCGGCTTCTCCAGCGAGGAGGTGCTGAGTGTCCGCTTCCCCCTGCACAGGGCTTGCAGGGATGGAGACGTCGGCGCCCTGTGTGCGCTCCTGCAGCGCGGCGCAAACCCGGCGGACCTCCGCGCCGAGGACTCCTTCTACGGCTGGACGCCCATCCACTGGGCAGCGCACTTCGGAAAGCTGGAGTGTGTGATCCGTTTGGTGCAAGTTGGGAGTGGAGTGAATGCCATGACGACGCGGTTTGCTCAGACCCCCGCCCACATTGCTGCGTTTGGAGGTCACCCAGAGTGCCTGCTGTGGCTGCTGCAAGCTGGAGCAGACATTAACAGACAGGATTACGTGGGTGAAACCCCTATTCACAAGGCAGCCCGCTCTGGCAGCATGGAGTGTGTTAATGCTCTTTTATTACAAGGAGCAAAAGCAGAGTAA

Function

symbol description
ankrd10 Orthologous to human ANKRD10 (ankyrin repeat domain 10).

NR:

description
ankyrin repeat domain-containing protein 10 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014367 True 822 mRNA 0.63 4 11167640 11175442

Neighbor

gene id symbol gene type direction distance location
AMCG00014366 NA coding downstream 22815 11139452 ~ 11144825 (-)
AMCG00014368 NA coding downstream 45809 11104978 ~ 11121831 (-)
AMCG00014364 NA coding downstream 71207 11088747 ~ 11096433 (-)
AMCG00014360 NA coding downstream 176496 10974465 ~ 10991144 (-)
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding downstream 193523 10961249 ~ 10974117 (-)
AMCG00014372 atp11a,LOC106575518 coding upstream 284171 11459613 ~ 11502601 (-)
AMCG00014380 rcbtb1 coding upstream 521747 11697189 ~ 11722453 (-)
AMCG00014379 spryd7,LOC108430519,LOC107600395,LOC108266652 coding upstream 574749 11750191 ~ 11755461 (-)
AMCG00014385 NA coding upstream 691169 11866611 ~ 11867529 (-)
AMCG00014386 LOC106575503 coding upstream 707053 11882495 ~ 11891473 (-)
G69539 NA non-coding downstream 346568 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 371451 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 374494 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 390199 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 394218 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 594248 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 703655 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 1794811 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1909921 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 2126482 13301924 ~ 13302379 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 30554 11125029 ~ 11137086 (-)
G69537 NA other downstream 369493 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1106410 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1149889 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 1850473 9305239 ~ 9317167 (-)
AMCG00014374 NA other upstream 484569 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1912166 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 5546631 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 6271426 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 6413825 17589267 ~ 17621151 (-)

Expression


Co-expression Network