AMCG00014379 (spryd7,LOC108430519,LOC107600395,LOC108266652)


Basic Information

Item Value
gene id AMCG00014379
gene name spryd7,LOC108430519,LOC107600395,LOC108266652
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11750191 ~ 11755461 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014379
GACGCCGGGATCCGCGCCCGCTGCCGCTCCGCCAGGGGGCGCTGTCACTCTGACGAGACACTGCTTTTGTGAGCTCCTCTTTGGCCGGTGAGGACGGGCCGGATTTATTTCCGGAGAGAGGAGAAAGTGTGGCGTCGGACTGTCATGGCCTCAGTTTTCTGCTGCTGTCTGAGATGCTGCGGGGACGGGGGGTCTGGACATATCCCCCTGAAGGAGATGCCCGCGGTGCAGCTGGACACACAGCACATGGGAACGGACGTTGTCATCGTGAAAAGTGGGAGAAGAATATGTGGCACGGGAGGCTGTCTGGCCAATGCTCCGTTGCACCAGAATAagagttattttgaatttaaaatccaGTCCACAGGGGTGTGGGGCATTGGGGTAGCTACACAGAAAGTCAACCTGAACCAAATTCCTATGGGGCGGGATATCTACAGCCTGGTCCTCAGGCATGACGGCTCTGTGTATCACAACAACGAGGAGAAGAACAGGCTTCCTGCCAACAGCATACCCCAGGAGGGAGACATAGTGGGTATCACGTATGACCATGTGGAACTTAATTTATACTTGAATGGAAAGAATATGCATTGTCCAGCTTCAGGAATTCGCGGAACAGTGTTTCCTGTAGTATATGTGGATGACAGTGCCATATTGGACTGCCAGTTCAGTGACTTCTACCACACAGCACCTCAAGGGTTTGAGAAGATATTATTTGAACAGCAGATCTTCTAACCAACACTACGCCTCTTTAGTGATACCCTGCACTGTTCTGaagctttttgtttgtatgtttctaCAAAGCTTTGTGGCTTGTTTTTTGTCCAGTGTGTGTTGAGTAttcctctgtgtgttttatacGCCAGTCACGTACCTCCAGTGTACACTGTCTGGTAGTCAGTTGGTGGAGTCtaggttttaaaatacacttaccTCTCTACAGAAGCCatgttttgttgctttatttaaaaggtACTGTATTGTAATGTGACTACTGTTTGCCAGTCATGCTCTTTAAACTGTTTTTGGAGACAATGCAAACCTATTGTTAAATAAGCAAACTATTCTTATTTTGTCAAGACATATGATGCCCCTAATGTGTAGAGACAAGACTTTCACAGTTCACGTTATTTAGAATAAttgcctttcttttcttttatgtcTGTCAAGCTAAATCAGTAGGTTTAATATCACTATTAAGGTTATATAGGTTATAAAGCCTTTGAACATATCAGTTATTTGCATATCAGTCTTGAAACTTTTTTTCCATCCTGATCCATGTTCtataaataacagataacagTTTGTGTTGTTGAAATGTTTCACTTATTGAAGAGCTTTCAtttattcaatataaatgtgtattaattcTTATATCTCATGTTATACACACATTGGGCAATGATACTTAAATTAACCTTCATGCACAATTTTGTGTAATTGTGAGTTTTTACAACTCTGcaaataatattgtatacaaCATGTATATGTGCctgtgtgaaatatatacacattgaatctttctttatttctttactcCACTCGTTTCACAACATTTGACACAGAAAGCCAAAACCTCAATCTAAAACGAAATCTTGATATTAACAAATTAGCTGAGCACGGTTTCCATTCATTTAACAGTTATTGACAggcttacatttttatttgtattttgtcccgtactgaaatgcatacgaccaactgtttttttttgtgtgtgttgaaatTCATTGGTTGTAAATGTTTCAGATGatggtgttttgtttgcactgatGAAATGTGAGTGTTAAGTATTCAAAAAATCTACAATTTTATGGTAAA

Function

symbol description
spryd7 Orthologous to human SPRYD7 (SPRY domain containing 7).

NR:

description
PREDICTED: SPRY domain-containing protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014379 True 1821 mRNA 0.40 5 11750191 11755461

Neighbor

gene id symbol gene type direction distance location
AMCG00014380 rcbtb1 coding downstream 27738 11697189 ~ 11722453 (-)
AMCG00014372 atp11a,LOC106575518 coding downstream 247590 11459613 ~ 11502601 (-)
AMCG00014367 ankrd10,LOC106586677 coding downstream 574749 11167640 ~ 11175442 (-)
AMCG00014366 NA coding downstream 605366 11139452 ~ 11144825 (-)
AMCG00014368 NA coding downstream 628360 11104978 ~ 11121831 (-)
AMCG00014385 NA coding upstream 111150 11866611 ~ 11867529 (-)
AMCG00014386 LOC106575503 coding upstream 127034 11882495 ~ 11891473 (-)
AMCG00014384 NA coding upstream 138299 11893760 ~ 11895883 (-)
AMCG00014390 il1rapl1,LOC100693228,LOC101468878,LOC102196907,LOC101172314,LOC107381071 coding upstream 228612 11984073 ~ 12003809 (-)
AMCG00014391 il1rapl1,LOC106575569,LOC106574938,LOC105023742 coding upstream 441578 12197039 ~ 12199190 (-)
G69539 NA non-coding downstream 929119 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 954002 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 957045 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 972750 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 976769 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 14229 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 123636 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 1214792 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1329902 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 1546463 13301924 ~ 13302379 (-)
AMCG00014374 NA other downstream 82654 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 613105 11125029 ~ 11137086 (-)
G69537 NA other downstream 952044 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1688961 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1732440 10001134 ~ 10017751 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1332147 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 4966612 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 5691407 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 5833806 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 6235190 17990651 ~ 18022095 (-)

Expression


Co-expression Network