Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014388 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 11943575 ~ 11944826 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030104 | water homeostasis | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0003707 | steroid hormone receptor activity | molecular_function |
| id | description |
|---|---|
| K08562 | NR0B1, DAX1; nuclear receptor subfamily 0 group B member 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014388 | True | 783 | mRNA | 0.53 | 2 | 11943575 | 11944826 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014387 | NA | coding | upstream | 42154 | 11900522 ~ 11901421 (+) |
| AMCG00014383 | NA | coding | upstream | 65861 | 11870025 ~ 11877714 (+) |
| AMCG00014375 | NA | coding | upstream | 175985 | 11766428 ~ 11767590 (+) |
| AMCG00014382 | NA | coding | upstream | 181674 | 11759901 ~ 11761901 (+) |
| AMCG00014381 | NA | coding | upstream | 231644 | 11711398 ~ 11711931 (+) |
| AMCG00014394 | NA | coding | downstream | 878727 | 12823553 ~ 12834319 (+) |
| AMCG00014393 | NA | coding | downstream | 890124 | 12834950 ~ 12841128 (+) |
| AMCG00014392 | NA | coding | downstream | 897964 | 12842790 ~ 12849371 (+) |
| AMCG00014402 | NA | coding | downstream | 1025432 | 12970258 ~ 12978095 (+) |
| AMCG00014404 | NA | coding | downstream | 1033339 | 12978165 ~ 12978428 (+) |
| G69739 | NA | non-coding | upstream | 159492 | 11783865 ~ 11784083 (+) |
| G69722 | NA | non-coding | upstream | 220808 | 11719318 ~ 11722767 (+) |
| G69681 | NA | non-coding | upstream | 302123 | 11641083 ~ 11641452 (+) |
| G69610 | NA | non-coding | upstream | 722301 | 11221070 ~ 11221274 (+) |
| G69556 | NA | non-coding | upstream | 981646 | 10959326 ~ 10961929 (+) |
| G69778 | NA | non-coding | downstream | 655278 | 12600104 ~ 12600313 (+) |
| G69833 | NA | non-coding | downstream | 1035433 | 12980259 ~ 12982434 (+) |
| G69959 | NA | non-coding | downstream | 1389388 | 13334214 ~ 13335185 (+) |
| G69961 | NA | non-coding | downstream | 1407507 | 13352333 ~ 13380404 (+) |
| G70054 | NA | non-coding | downstream | 1749989 | 13694815 ~ 13696871 (+) |
| AMCG00014345 | NA | other | upstream | 1791662 | 10147979 ~ 10151913 (+) |
| G69406 | tgfbrap1,LOC102780916 | other | upstream | 1934927 | 10003058 ~ 10008648 (+) |
| AMCG00014272 | tbc1d23 | other | upstream | 4461015 | 7464503 ~ 7482560 (+) |
| G68848 | NA | other | upstream | 4526981 | 7413640 ~ 7416594 (+) |
| G68830 | NA | other | upstream | 4594108 | 7346195 ~ 7349467 (+) |
| AMCG00014407 | LOC107725344 | other | downstream | 1301483 | 13246309 ~ 13251732 (+) |
| AMCG00014423 | pou2f1b,LOC107748141 | other | downstream | 1710412 | 13655238 ~ 13689188 (+) |
| AMCG00014456 | NA | other | downstream | 2244738 | 14189564 ~ 14205014 (+) |
| AMCG00014461 | NA | other | downstream | 2357621 | 14302447 ~ 14356868 (+) |
| AMCG00014470 | NA | other | downstream | 3277088 | 15221914 ~ 15242333 (+) |
