AMCG00014389


Basic Information

Item Value
gene id AMCG00014389
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 12721742 ~ 12726644 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014389
GCTGTGGAAAGGGAGCTGCTTAGATGCAAAAGAGACAAACCAGGAGAagctttcaatatatatatttttaatggtatttGGTGATCGCATTAAGGATAACGATGTGGAATAGCAGACCACTTTCAATCTGAACATTTATTCTAGTATTCTGTAGTCGCTGGAGATAAAGTCATTAAAGCAGTGGCTGAAAAGGCGCACTTTTTGGAAGTACTAGTAGCCAAGTAAGCTTTAATCCTGCTATTTAGGTGGGAAACGGGGAAAGCCCTACTGTGCAGTGTTTAAATATAGATTGCACAGCACGTTTGATGGTGATGCACGATTAAAAAAAGCGATTTGCCAAACAAAAGTGGTGTGTATTATTGTGATTCATTTGATCAACAAATAGGGTGAACAGGAAGCATGGCAACGTCTTGTCAGGAACGACGAGTGCTGGTGGAAATCCCTGCTCCTCAGCCCAAAATTTcagCTCACATAAGGAGGTCCTACTTTGATGCCTTGAACTACAGGGTGGGCCCATCACCCTACCCCAGAAATAATATAACCAACCAAGAACAGGATGAGTTGGCAGTGGAGCCCTCCACGAAAAAGCAGCGACTGAACCAGAAGAAGGGTGTTGGCTTGGAGCTTCACCTCATGGCCCTTTCCCAACAACAGCTCGTAGACCTCGTCAGTTCCTTGATGTTCCTGGAAGAGGAGAAAAACACTAAAGTTCTCTGTCCTGACCTGAAACTCTTACAAGAGCATCTGCAGTGTAAAAAAGCCAACGTGTATCGATCCATCCCTTACTCGCGACTGGGGTCCAACCGAGATGCACACTGCTACAGGAAGGCCTATCCTCACCTTCTGGCTTTCAAGCAAGCTTGTGTGGAAGGAGGCAAGTTGCTGCTCAAGTGTAAGCAGTGGGACGCAGCCCTGGAGTTCGGGCTGAGCGCGTGGAGGTACACCAGCGAGTTGCCGCAGTGGGACACCAGCAGCCACAACATGCTGAGAGCGCAGTGCTTCAGCACATTGGCAACACACTGCATCACAGCTTTGCAACAGAGCTGCATTGGGATGGCCAAGTGCCTGGAGCTGAAAAGAAGGTTTAAAATTTCATGGACACAGTGCAAAGAGATCACACCATGTATTGAGGAACTGGAGAGAATGATTGACAATCTGCAGAGCAGCACGCCTGACTCCACTGggttttgatatatatatattttttttttttccaagatgtGTATATAAACCCGTGTTGTGCTAAAGGGAGACTTCAGTACCCATGCACAATGCacaattcctttaaaaatatatatactatttaaaAGAAGGGGAAATCATACAAGTTTTGACTTAAAGGCAATATCCCAATTTACTAAAGTTGTCGATGGTGTGAACCCCGGGGGAGGGGAGCGAGCACATAACATTACGCATATTTAAGCTAATTTTGGGCAGAAATTCCACTTCTGTTaatctttttatataaatatttctggagaaactattttttatttatttaatgttctctcagacttaaatgaaatgcatttcaggtACTATTTATTCAGTGGTCATTAAGGAGATGCATCTTTGGTACGAATTTCTATTTAATGAGTTGCATCAAAAATGTAGCCAGAAATTAATATTCTCAGCCTGTAGATTTAAATCTCTTGTGTGTCTGATTTTTCATATCGGTGTCTGCAAGCTAAGGGGCATTGATCAGTGTGGAGAAATAGGTGGCTGGTTAAATTATCCACTGATCTGGATTTGACCtcagcagtttaaaaaaaaaaaaaaggtttaaggctaatttaaaactaaattgcaTGGGTTATCTTGGTTTCCTCAAccaccttttttttcctctttctgtctGACTCTCTGGATTTATACTTGAGCCCTTTTCAATGTTCCCTTTGAAAGATTGCACATGGTTTCTGAGAAACTTGAATTTTATTTAAGGAATAACAATCCTGTTTTATGATGCCATTCAAAGTACCTTGGTTAGGTGCTGTGCTTGTGTTTGGATTCCTCTGAAAAATTAATTGGCCAACAGATCAGTTTTCCCATTACAGTGCATTTCATTGTAAGGACTTGAAACAACCCTACAGCTCATCATGCTGTCAACAAGGAACCAGACTAAGGCTGTTTGGCATCAAATTCACTTCATTTGAATAAGCCTATTGTAACATCCTCTGAATACCTAAAAGAACACTGATCTGGATGTGTGAAACCAGATGATAGTGCATTtgttatgtataaataaagatatttgCAGAACGGTAATTGTTGTTTCTCAGTGTCAAAAAAACAACCGTACGGTTATAATTAAGGGAGTACTAGCTATAAATCGCcctacattttgttaaatagcCTTCTATTTGTGTACTCTATTAGcattccattacatttttataaatatctgtGACAACAGGCCCAAGTTTTATGTGTCATatattcacaattaaaatgttgcattaagcacaatttgaaataaatggctTCTGAAAGCTCTTAAATCCTCACAAATCATTAGCCATTTAACTGTGCTAATGAGTTCCAGCTGTATGGTGGGAGAATAAAGATGAGCATTGACTAAGCAGAGTTGGGAGCTGATGTAAACATTAAGGGAGAGACTGAGCACTCGGGTATGCCCATTTATTATGGGCTTGTCTGATTGATCTGGTTGAGTGTTTAATTGAAT

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis
ko04115 p53 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014389 True 2686 mRNA 0.40 6 12721742 12726644

Neighbor

gene id symbol gene type direction distance location
AMCG00014391 il1rapl1,LOC106575569,LOC106574938,LOC105023742 coding downstream 522552 12197039 ~ 12199190 (-)
AMCG00014390 il1rapl1,LOC100693228,LOC101468878,LOC102196907,LOC101172314,LOC107381071 coding downstream 717933 11984073 ~ 12003809 (-)
AMCG00014384 NA coding downstream 825859 11893760 ~ 11895883 (-)
AMCG00014386 LOC106575503 coding downstream 830269 11882495 ~ 11891473 (-)
AMCG00014385 NA coding downstream 854213 11866611 ~ 11867529 (-)
AMCG00014395 NA coding upstream 3083 12729727 ~ 12739665 (-)
AMCG00014396 filip1l,LOC100693076,LOC102213048,LOC102798342,LOC101473988,LOC105027992 coding upstream 51839 12778483 ~ 12780838 (-)
AMCG00014397 NA coding upstream 123363 12850007 ~ 12875536 (-)
AMCG00014398 NA coding upstream 180760 12907404 ~ 12982495 (-)
AMCG00014411 impg2b,LOC108432621,LOC107704545 coding upstream 448567 13175211 ~ 13203807 (-)
G69759 NA non-coding downstream 841286 11879097 ~ 11880456 (-)
G69743 NA non-coding downstream 950349 11769690 ~ 11771393 (-)
G69539 NA non-coding downstream 1900670 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 1925553 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 1928596 10792919 ~ 10793146 (-)
G69849 NA non-coding upstream 243609 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 358719 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 575280 13301924 ~ 13302379 (-)
G69973 NA non-coding upstream 577782 13304426 ~ 13375879 (-)
G70034 NA non-coding upstream 896471 13623115 ~ 13623381 (-)
AMCG00014374 NA other downstream 1054205 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 1584656 11125029 ~ 11137086 (-)
G69537 NA other downstream 1923595 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 2660512 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 2703991 10001134 ~ 10017751 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 360964 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 3995429 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 4720224 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 4862623 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 5264007 17990651 ~ 18022095 (-)

Expression


Co-expression Network