AMCG00014394


Basic Information

Item Value
gene id AMCG00014394
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 12823553 ~ 12834319 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014394
ATGCaTGCTTCTGAAGCTGAGGGAGAGAAAGCTGCAGAGGACATTTCTGAAGAGAAGACaactaagaaaagaaaaggacagaGTGCAAAGCCAGTAAAggcaaaaaagaagaaagtacAGGCAGAGTGCTTTGTTGCTCAGGAGAAGaaaaatgatgatgaagatAAGGACTCGAAGAAAGCTAAAAGAAGGCGAAAGaAGAAGATATCCAATGTCCTGGCTTCTTCAGCCCCAAAGCCTGGGTGCCCAGCTGACCTACAGAAACTTATTGAGGAGGATTATTCCAATAAGCGATCAGTCATTGAGATGGAGGAGCTCAAACTGGCAGATTCTTGTTTCCTCCCAAGCAATGACCTTACCCACAGCCTTTCCTCATTTCTGAAAGAAAtttgtcCTAAATGGGCGAAGCTTACTAAACAGCACATAGAGAAGAAGTCTGTGGTTTTACTGATTATCTGCAGCTCTGCTCATCGTACCTTGGAGCTCATCAAGCAGCTGACAACCTTCAAGGGGGAGTCGAAAGTTCTCAAACTTTTCGCAAAGCATATCAAGGTGGAGGAACAAATCAAGCTGCTGGACAAAGGAGTGACACACATCGGTGTAGGAACCCCCGGCAGGATTACGGCTCTGATAGACAAAGGCACTGACCTTTACAAAATCTGTGTAAAGTGGTTTAGCCTAAATGGCTCCCCAGCTGATGGCTTGACACTCAAAGCGCTGAAGTATGTGGTGTTAGACTGGAACTGGAGAGACCAGAAACTGAGGCGAATGGCAGATATTCCTGAGgtcaGAGTGGACATGCTGAAGTTTCTGGAAGCTGGAATCATCCAGGCCTGCAACGCTGGAAGTCTTAAACTGGGGCTGTTTTGACAGACTTTGATTCAGTATCATGGATAATGATCCAGCAGAACTGCAGCATAAACCTTTATCCTGTGTGCAGAGTCTTAGCTAATGTTATATGCGTGACTATTTCAATTGCCTGTGCTTTATCTCaccttttgtttaattatacgttgcttttattttgtcattgttatcAGCAATGATCTTTGCTTATGAATATGTAATAAATTCACCCAAAAAgga

Function

GO: NA

KEGG:

id description
K14784 CMS1; protein CMS1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014394 True 1086 mRNA 0.43 11 12823553 12834319

Neighbor

gene id symbol gene type direction distance location
AMCG00014388 NA coding upstream 878727 11943575 ~ 11944826 (+)
AMCG00014387 NA coding upstream 922132 11900522 ~ 11901421 (+)
AMCG00014383 NA coding upstream 945839 11870025 ~ 11877714 (+)
AMCG00014375 NA coding upstream 1055963 11766428 ~ 11767590 (+)
AMCG00014382 NA coding upstream 1061652 11759901 ~ 11761901 (+)
AMCG00014393 NA coding downstream 631 12834950 ~ 12841128 (+)
AMCG00014392 NA coding downstream 8471 12842790 ~ 12849371 (+)
AMCG00014402 NA coding downstream 135939 12970258 ~ 12978095 (+)
AMCG00014404 NA coding downstream 143846 12978165 ~ 12978428 (+)
AMCG00014403 NA coding downstream 144152 12978471 ~ 12979109 (+)
G69778 NA non-coding upstream 223240 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1039470 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1100786 11719318 ~ 11722767 (+)
G69681 NA non-coding upstream 1182101 11641083 ~ 11641452 (+)
G69610 NA non-coding upstream 1602279 11221070 ~ 11221274 (+)
G69833 NA non-coding downstream 145940 12980259 ~ 12982434 (+)
G69959 NA non-coding downstream 499895 13334214 ~ 13335185 (+)
G69961 NA non-coding downstream 518014 13352333 ~ 13380404 (+)
G70054 NA non-coding downstream 860496 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 1333127 14167446 ~ 14171012 (+)
AMCG00014345 NA other upstream 2671640 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 2814905 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5340993 7464503 ~ 7482560 (+)
G68848 NA other upstream 5406959 7413640 ~ 7416594 (+)
G68830 NA other upstream 5474086 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 411990 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 820919 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 1355245 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 1468128 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 2387595 15221914 ~ 15242333 (+)

Expression


Co-expression Network