AMCG00014403


Basic Information

Item Value
gene id AMCG00014403
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 12978471 ~ 12979109 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014403
ATGGTGGCCATCCTGGGATACCTGGCCCAGAAGGAGCAAATGGCCCACCCGGTTTACCTGGTCCTATTGGGCCACCAGGAGGACTTGGCTTTCCAGgacaacctggCTTTCCTGGAGAAGCAGGCCAGCCAGGACCAAGAGGTTTACCAGGTCCTTTGGGCCCCAAAGGGGAAAATGGACACAAAGGCCTACCAGGACTTCCCGGGACCCCTGGAGTACCTGGGCCAAAAGGAGAAGGTGGACAGCCAGGAGAGCAAGGCCAACAAGGCCCCAAGGGAAAACAAGGGCTCGCGGGACCTGCGGGGGCCCCAGGGAAGCCAGGAGCTTTTGGACCTCCAGGTCAACCTGGACAGCCTGGACAACCAGGCCCTCCTGGCCCACCTGGTCCACCAGCCCAAACTCCAGGCCTCGGCCAGATCATGCCTGAAATGGGTCCAGGTTTGGACGGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014403 True 453 mRNA 0.61 3 12978471 12979109

Neighbor

gene id symbol gene type direction distance location
AMCG00014404 NA coding upstream 43 12978165 ~ 12978428 (+)
AMCG00014402 NA coding upstream 376 12970258 ~ 12978095 (+)
AMCG00014392 NA coding upstream 129100 12842790 ~ 12849371 (+)
AMCG00014393 NA coding upstream 137343 12834950 ~ 12841128 (+)
AMCG00014394 NA coding upstream 144152 12823553 ~ 12834319 (+)
AMCG00014399 jagn1,jgn1a,LOC106574769,LOC105027989 coding downstream 30596 13009705 ~ 13015654 (+)
AMCG00014400 NA coding downstream 50777 13029886 ~ 13040944 (+)
AMCG00014401 tfg,LOC102777061 coding downstream 78756 13057865 ~ 13065977 (+)
AMCG00014406 NA coding downstream 259964 13239073 ~ 13240110 (+)
AMCG00014405 NA coding downstream 261731 13240840 ~ 13245634 (+)
G69778 NA non-coding upstream 378158 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1194388 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1255704 11719318 ~ 11722767 (+)
G69681 NA non-coding upstream 1337019 11641083 ~ 11641452 (+)
G69610 NA non-coding upstream 1757197 11221070 ~ 11221274 (+)
G69833 NA non-coding downstream 1150 12980259 ~ 12982434 (+)
G69959 NA non-coding downstream 355105 13334214 ~ 13335185 (+)
G69961 NA non-coding downstream 373224 13352333 ~ 13380404 (+)
G70054 NA non-coding downstream 715706 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 1188337 14167446 ~ 14171012 (+)
AMCG00014345 NA other upstream 2826558 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 2969823 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5495911 7464503 ~ 7482560 (+)
G68848 NA other upstream 5561877 7413640 ~ 7416594 (+)
G68830 NA other upstream 5629004 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 267200 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 676129 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 1210455 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 1323338 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 2242805 15221914 ~ 15242333 (+)

Expression


Co-expression Network