AMCG00014406


Basic Information

Item Value
gene id AMCG00014406
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13239073 ~ 13240110 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014406
ATGGATGGGTTTGCAGAAATAAGTGGTGATCCCTCCTGTGACTTCCAGTATTATTTCAACCAACAAGGTCAGCTGAGACACAGAGTGAGTGAAGAGGCCTTTGTGTTTCGGTACATTAAAGGAGACGTCAAAGGTAaccagcagcagctcctggcCCTGGAGCAGTATGTTACCAAGCATATCTACACACTGCTGGAGGAGGAGTGCCACCTGAACAAGATCTACATTCCTGTGGACGCTTCTGATCGACATCTTAGTGCTTTTTTCTTTATGAGCCCTGGGGCGCTGGACCAAAATGGCCTGGTTATTCTAATTCAAGACCAGGGAACCATACGTGCTGGACAGTGGAGTAGGAGGATGATAGTTCAAGAAGATGTAGAGAAAGGCACTCAGATCCCCTACATCCATAAAGTTCTGGAGGACTCTTGTGGGATTATTGTCATGAACCCCAACGATAACTCTGTTGAGCTACAGCACAACTTCGTTGAGAATGAAGACGTTGCAAACCAGCAGCGTTTCCTAATGTCCAAGAGTGGCAGCAGCACCCCAGAAGAGCATGTGAGGTATGTGTGGGACTTCTTTGTGTCCAAGTGTGCTGCCACTCACATTGCAGTGGTGACCCATGGGTATGGGGGCCTGGCATTTGTTGACCTCTTGTCTCACCGCTCACAGGAGGTGCAAAACAAGGTTTATGCAGTGGCCTTTATAGACTCATTCCATAATTTATGGCACCAGGTCTTGGACAAGGACAGCCAGGAGTGGCTCAAAAAGCATTGCCGCAAATGGGTGCTCAGCTCTAAGCCATTGGACCGGCCCATAAGCTTCTTGAAGGTTGACTGCCCTCAGGTATCCGCTGGCACTGAAAGCCATGATGCTGCCCCCTGGATGTGTCTGCGATCCATATTTAGGTTTTTTGCCAAGACCATGAAAGCCCACACCACCATCCCCTTCACCCGGGCTGCCATCATCACCAGGAGCAAAAGCCGAAACCGGCTgactcagagcaggacagcctCAGAAAGACCAGCAGCATGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014406 True 1038 mRNA 0.50 1 13239073 13240110

Neighbor

gene id symbol gene type direction distance location
AMCG00014401 tfg,LOC102777061 coding upstream 173096 13057865 ~ 13065977 (+)
AMCG00014400 NA coding upstream 198129 13029886 ~ 13040944 (+)
AMCG00014399 jagn1,jgn1a,LOC106574769,LOC105027989 coding upstream 223419 13009705 ~ 13015654 (+)
AMCG00014403 NA coding upstream 259964 12978471 ~ 12979109 (+)
AMCG00014404 NA coding upstream 260645 12978165 ~ 12978428 (+)
AMCG00014405 NA coding downstream 730 13240840 ~ 13245634 (+)
AMCG00014414 NA coding downstream 25907 13266017 ~ 13274303 (+)
AMCG00014417 NA coding downstream 36463 13276573 ~ 13284294 (+)
AMCG00014416 NA coding downstream 51219 13291329 ~ 13301873 (+)
AMCG00014415 eed coding downstream 83257 13323367 ~ 13331090 (+)
G69833 NA non-coding upstream 256639 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 638760 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1454990 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1516306 11719318 ~ 11722767 (+)
G69681 NA non-coding upstream 1597621 11641083 ~ 11641452 (+)
G69959 NA non-coding downstream 94104 13334214 ~ 13335185 (+)
G69961 NA non-coding downstream 112223 13352333 ~ 13380404 (+)
G70054 NA non-coding downstream 454705 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 927336 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 1226594 14466704 ~ 14467744 (+)
AMCG00014345 NA other upstream 3087160 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3230425 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5756513 7464503 ~ 7482560 (+)
G68848 NA other upstream 5822479 7413640 ~ 7416594 (+)
G68830 NA other upstream 5889606 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 6199 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 415128 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 949454 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 1062337 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1981804 15221914 ~ 15242333 (+)

Expression


Co-expression Network