AMCG00014414


Basic Information

Item Value
gene id AMCG00014414
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13266017 ~ 13274303 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014414
CCCTAAGGggtaatatacatatatattcatacattagAACGGTATATAATCCCGTAGTTATATGGAAAATATTGTTTAGTTAACCATAAATAGAAGCAGTCACAAATGGGAGTATCAAGTCTACAATTAGGCGAATATGGCCCAGTGGTGGACCTCTCTTCCCAGGGAATCCAGAAGCTGGAGCCCTCTCTCCCCTGCCCTCCTGGGTCTCACACTCTGATCCTGGATGGGAACCACATCATAAAGCTGGAGCACCTGGAGAAGTGCAAAGAGCTTTTGCAGTTGTCCGTTGCCAATAACCGCCTTGTTCGCATGATGGGAGTATCCAGACTGGTAGACCTCAGAGTACTGAATTTACCCAACAACAGTATTGGCTACATAGAGGGGCTAAAGGATCTGGTACACTTGGAGTGGCTGAATCTGGCTGGCAACAACATCAAGGTCATTGAGCAGCTTAACAGCTGTATGGCTCTTAAACATCTGGATTTGTCTGACAATAATATCTCTCAGATTGGAGACCTCTCAAAACTTTCATCTTTGAAGACTCTGCTCCTGCATGGGAACATCATCACTACACTGCGCAGTGTTCCTGCCCACCTGCCTCCAGAGCTCACCATCCTGTCCCTGGCAGAGAATGAAATCCGAGACCTGAATGAGGTGTCTTACCTGGCTGCCCTCCCTGAACTGGAGCAGCTGTCCATCATGAGTAACCCCTGTGTCATGGCCACCCCTTCTCTGCCTGGCTACGATTATCGCCCCTACGTAGTCAGCTGGTGTCTCTGCCTTAAGATTCTGGATGGCTATGTGGTGTCACAGAAGGAAGGTTTAAAAGCAGAATGGCTCTACAGTCAAGGTAAAGGGCGCTCATACCGCCCTGGACATCACATCCAGCTGGTTCAGTACCTGGCGTCTGTCTGTCCTCTCACCTCCACCCCAGCCCTGCAGTCTGCAGAGGATACCAAGCTAGAGAAAATCCTGAACAAGCAAAGGCTTCATCAGAAACAGCTGCTTCAGCAGTCCCAAAAAGGAAGTCCCCCGATCTCCTCCACACCCAGCAGGCCCACTCAGCTTGTGCTGGAGCAGCGCAGCCCTACCCAGTCTCCAAGGGCATCTCTAGAAAGAGAGCCAGCAGCCCCACAGATTAACACCTGGTTGGGCCTCAGTATCTCCTCTGACCATTGCTACGCTGCCGATCCGGCTTCCCGCCTGCCCGCCCCCCGCAGTGAACCGCTCTTCCTGGAGGACATGCAGACGGACGAGGATAAGCTCAGCTGCAGCCTGCTGTCCTCAGAGTCCACATTCATGCCCGTCGCCTCTGGCTTGTTCCCACCATCCCCCAGTCACCAGCTCACACTGGACatcgaggaagaggaggagcaggaCTGTGGGACGGCCATCCTGCACCTCACAGACTGCATAGCCGACCAagagcaggagggagagggCGAAGGGCAGGAGAAGAGCACAAAGCAGGATGTCTTTACTCCAGGCATCTCTGATTCACACGTGAGCAGCGTGGACTTCCCAGCAGGCATTAGCAGCTATGTGCAGATGGGCAGCCAGCATTTAAATGGCGCACTGGCCTTCGAGGACTGTTCGGTCTGCACTGTTGTGGAcagggagcagcagcaggaagcCTTGGTCCACACTAATGACAAGAGGTGTCCCAGCTCGGATGAAGCCGCCATAATAATCCAGGCATGGTGGCGGGGATGCTGGACCAGGCGTTTCCACCCCAGGGCAAAGGAAGTCCGCTCAGAAATCCGTCTCCGCAGAATGCAGGAGCACATAGTATTTCTGTCCACCGAGCTGGACCGGGTGAGAAAGgagcaggaagaggagagaaTACAGAGGCTTGTACAAGAAGATGCTGTGAAATTTCTGTGGCAGCAGCTCCAGTCCATGCAGCTCTGGCAGCAGTCTGTCAACCAGCAGCTCCAATCCCTTCCCCATCGAGCTGTCCCTGTGTCCAGCTCTGTGATTGGCCTGTCTTCCTCCTGTCTGTACGAGCTTCCACCACCGCACTCCTTAGCTCCGGACTTCAATGGCATGGCGGCGCCCTGCTGCGATCACTCCTTCCCCGACTCGGGCTTCCACTCCTCGGGCGAACCCCAGGGAACTCTGACTACCTGTCACAGTGCCACGGATGACAGCCTGAGCTCGGCCACCGGAGACTCCCTAGAGACAGTCCGGCCCTTGTCTGAGGGAATGAAAGAAGGCAGCGTTTTGAGTCCCGGGACAGGCAGCCAGGACAGCTCTCGCAGCGAGCAGGACAGCAGCCTCCTGCAGCAGTACCTCACCTCAGTCCAGCAGCTGGAGGAGGCTGAGGAGGGGGCTGGGGAGAGGACGGGGAGCTTTATTCAGTGCGAGTCCCCGGGCTCCCCACTACTGCAGGCTTCAGAAAAGACCCCCCCTGCCTCTGAGACAGACCATGCCCCAGTCTTTGAGAGAAATAAAGCGCCTGAGAGGCAGGCCATGCTCCTGTGAGCAGAACTGtgatcagagagagagcagggaagGGGCAGCGGTGGAGGAAAGCATTGTACTCCACTTCCTCTCACTGCAAGCGTGCTGTACCCTAGAAGAGGCAGGACATTCACCAGAGACTTGAAGTTTGTTACGTTGACACACTAACGTATCAGCATGTGAACTGCTGTACTCACCTCATGGATTTCTGAGAAGCTTTTTGAGATCCTCAATTCTGAACAAAGTCAAACATCACAAATCAAAACCGTTAGTCTTTTGCCTTTGAACATTTATGAGTAATACATCTGTAATTTTGACCTGTTTGCCTATAATCATACAAATTATGTATTGAAACTTTAATGAATGCAGTATTTATAGCAatgatatattaatattatccCAGATCAGCCTCCCTTATACCTTGACAAACAGGATATGCCATTTCAGTACCGTGATAAAGGTTTTGTGCTGCACAAGGGGAAGGATAATTTCCCTGGAGTGATTCTCTGTTGAGTCTGATTTCAGACCAAAGCTTGTAAATTAATATGAGGTTTTCAACATCTCTAAATGTAGCccaaatatgatttattatcaTAGTGAGGCTGCGTTATTTTgaagaattaaaatgcatgtcgTTTATTATGCCTTATTTCCATCCCGCTGTCAGGTAAGGTCAGTCTTTGGGTTCCTTTGCGTCCAGATCTCCAAGAGGAAGTCTACcgttacatttcagaaaaaaattaacACTCCCCTTGGAAATCCAACATTAAGAAAATGgaatattgtgatattttctGGACATAATTGTAATCCAAGAATGCAGTTTTGCATTAGGGACTCTTCTAATGCTGATCATTCCCCAGAATGGTAGGATGACaaagctttttgttgttgtagttcttttttatttattattttgtgcaaaCTACAGGTATATACTGCTCACCAGTCGATAATGCTCTGTGTAATGTAAGTAATCAATGGCTCATTGCATTTTCTGCTGCAGTAACTGTCATAGTCAGTCTTGCATAGACCAGTCATGTAAATACTTTCAGCAGTAGGAAAGTGTAGGGCCATTGAAGTGGAGATGATGTCATCCATTATCGGCAAATGATATGCAGTGAAGTCAAATGACACTTTGATTAAAGAAGTATACGATATACATGTGGACTTTCTGTGGCAATTTATATGTTTTCATAACTCCTATATAGACAAATGTGCACTTATTCTGGTTGATTTCCCCCAAAATTTTCAATCTCTACTATTTGTCAAGAATTCATATATTAAAGTCAAGTACAAACTGTGCACTTTCTGTTACCGATATCCTTGGTCTAAACTACAAAGACATATTCTAGTTGTCTGCTTATGGACAAGAAGGTTCTTCTGTGAATAACCACTCATTGTTTGATACGTTGCTTAAAAGTTAGTGTGCATGTTCTGATGAGTTATCCTGA

Function

GO: NA

KEGG:

id description
K16717 CEP97; centrosomal protein CEP97

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014414 True 3920 mRNA 0.48 11 13266017 13274303

Neighbor

gene id symbol gene type direction distance location
AMCG00014405 NA coding upstream 20383 13240840 ~ 13245634 (+)
AMCG00014406 NA coding upstream 25907 13239073 ~ 13240110 (+)
AMCG00014401 tfg,LOC102777061 coding upstream 200040 13057865 ~ 13065977 (+)
AMCG00014400 NA coding upstream 225073 13029886 ~ 13040944 (+)
AMCG00014399 jagn1,jgn1a,LOC106574769,LOC105027989 coding upstream 250363 13009705 ~ 13015654 (+)
AMCG00014417 NA coding downstream 2270 13276573 ~ 13284294 (+)
AMCG00014416 NA coding downstream 17026 13291329 ~ 13301873 (+)
AMCG00014415 eed coding downstream 49064 13323367 ~ 13331090 (+)
AMCG00014419 NA coding downstream 65884 13340187 ~ 13360020 (+)
AMCG00014418 NA coding downstream 87445 13361748 ~ 13371376 (+)
G69833 NA non-coding upstream 283583 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 665704 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1481934 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1543250 11719318 ~ 11722767 (+)
G69681 NA non-coding upstream 1624565 11641083 ~ 11641452 (+)
G69959 NA non-coding downstream 59911 13334214 ~ 13335185 (+)
G69961 NA non-coding downstream 78030 13352333 ~ 13380404 (+)
G70054 NA non-coding downstream 420512 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 893143 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 1192401 14466704 ~ 14467744 (+)
AMCG00014407 LOC107725344 other upstream 14285 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3114104 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3257369 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5783457 7464503 ~ 7482560 (+)
G68848 NA other upstream 5849423 7413640 ~ 7416594 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 380935 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 915261 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 1028144 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1947611 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 2401328 15675631 ~ 15685899 (+)

Expression


Co-expression Network