AMCG00014417


Basic Information

Item Value
gene id AMCG00014417
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13276573 ~ 13284294 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014417
gattattttaaagacCCACCCCTTTGCTTTTCAGCCATTGGAGGACGGGAAGCTCTTCACTGCACTGATCTGTGCGACTGGGGCTGAGAGGCGGCTGCTTCTCACTCGAGCGCATGATTGAATGGGTCTGTATCTACATGTaagtattatttcagttattatttattcagatcAAGCACTGCACCTTTGCCTCCGTTTGTTTTGATCGATTCCAGCGAATTCGGATCAGCTGCTGATCCAAACCAGCTCGGCTCAGCCACAGTGTCTGCACAGGCCGGCTCTGCTTCATGATACGATGGTGGTGATCCTGGTGGCCAATCTCAAGATAACGGTCTTTATTGATCTTTTAGGTGACGATCTGGTAATATAATCGACATGCATGAAATGAAGTGAGCCTGGAAATGTGGTTGTTAGTGTTGATGGGTTGACTACTGTGTTGCCTCGGCTTGAGGAATGTCGGTGAAGTACCCAGATCAATtagatgtgtgttttgcaaCGAGTTTATGCAGAACTAGGGCTTGCATTTGAATAAactatgaatatttaataatatatatttaaaacgaTCTTTCGTTTAAGGCATATACGGAATGATTAATTTAGACATGGCGTGTATGTATCTCCGGAAATCGGCAGTAATGTCGGATATATCTGGGTATATCTGACGTTTAAGGGATGGAGGTGATAGTACGTACACAGTAGTACGTTCAATTGCCACAcgaatgtatgcatgtgtgtgtgcttcaaaatacgtatatatttatataatatcatGCATACTGTAGCGCTGATGGTCACATGAGAGTTACAGGCCTTGAAATGCTGCATGTGTTTTGGTTGCACATATCTgtattattcatgtatgtatgtatgtatttattgtattagcagACTGTGCATATAAGGACTTCAGCCCATGTTGTTCAGCATTCTAGCACATCATTTGGTTTCGAAATCATGGATTTACAAGATCGAAATATAATGCTAATGCACAAggttttacagtttacattttccTGGTCTCCAACTACCCATCACATTAATTTActaattcaaattgttttttacCGTTATAACACATTACAATCTGTCACACAAAATATCTGATGTTTTTTTGGTACGATCATTCCTTATTGTGGTTACATCTGTTAAATCCTGAtgaaatgattattattaagctTTAAGGTATGATGTGTGCATTGTCTGTGTACTTTGCCATGCTGGTAATGGTAACTGCAGTTTCTGGTAGATACATGATAGCAAAAAGGAACAACTTAGTAACTAACTATTTTGAGTATGTATTAGCAGAAGCAAACTTTACTATTATTTGCAATTCCCAACCCAGGCCGTTACcgctatacaaatatattattctgcACATACTCCAAATGCAAATCTAATCAAGACCTCTATGCAGGGTGGGGTTACTCTAATCAGATCTCACTATATACTAATTACATGTGTGGTGAAAAATCACtaatcatttatataatttaataatcgGTTGCCAGTTGCTTCTGTATTACTGCTTGCTCCAATATAAACGAGAGGTCTGCCCCCTCCCTTTGTGATATGCCCCTTCAGAGGTGGGATAACAGTTGCTTGTAACCTGGAATTATTAAGACTTTGGAGATCAGCATTCGATGCATGCTTGAATAGCAAACCAGCCTTCTAAACACGAGCAATGTGTCCTGGATCATTTTGAGAGACATTATCtccttttcaattttatttagttttttccagtgGATGAGCATTTTCAAACTCTGCTGACAGTGGCAATGACAACACAGCGACAGCTGTCAGCAGGCCTGTGATGCCAATGGAAAATGGCAGAGGAGGCCAAATCAGGGCACCACAATGTGGAGTAATCTGTCAAAATTTACCCCGCTTTTTGTGTTCTTGGCACTTTCTGGTCTCATCTTCCTCTTGAGAAACATCAACACTTTAGAGAAATTTAACTGCAAAACTGCCTCAGCACTTTATCACTTCCAGAACTCCATCAACATAGCCTTCAGGCCTCTGGGCCCGGTGGACAGTAACCACTCGTATTGTGGCTACCCAGCCCTGGACCTGACTCCAGAAGAGGTGGTTGAGGAGCAGTACCTGTTGGATTTCGTTGCTTGGCCGGAAACCTCACTGCAGGGCGTGTCGTTCCGCCAGAGCTCTGACCCGGCACACAGCTTCTTCGTCATCCTTGGCTCCGATGGGGACTTTAGAGTGGGTGAGCAGCTTGAGGTCCTGGTCCACATGCATGACTTCCAGGGGCAGCCCAAGCAGCACGGGGGCGACTTCCTGCTGGCCCGAGTGCACTCTCCGGAGCTGAAGGCAGGGTCGGCTGGTAAGGTGGTGGACCACCAGAATGGCTTCTACTCGGTGTTCTTTGCCTTGCTGTGGCCGGGGGAGGTGAGAGTGTCCGTGACCCTGGTCCACTCCAGTGAGGCCGTGCAGGTGCTGAAGAGGCTGCGGGAGGAGCACCCCGACCGGGTCTATTTCAAGAGCCTCTTCCGCTCCGGCTACTTCACCGAGACAACCCAGTGTAATCTGTGCCTGTCTGCCCACGAGCCCCTCTGCAATTTCACAGACCCCCACACCGGAGAGCCCTGGTTCTGTTACAAACCCAAACTGCTGAGCTGCGACACCCGTGTTGACCATGCCAAGGGAGGCTACCAGAAGCGTCTGATCAGCAGCAGAGAGGGTCTTCTTTTTCAGAGtgaTATTAACATCAAGATTCCTTTATTGGCATCTGGCACAGACCGTGTGACAGTGAAACCCCAAGAAAGTAAAGATAAATGGGAGCTGGAGAGGAATGCCAACTCAGATGTTATCAAATTCACTCCCTCTGGGTTCTATTACCAAGATGTTTGGAAGTCAACGGCAAGGCTGGTGGTGCGGCAGTTCAATGACACGTCAATCACGCAGTGTCTGCATGGGAAGGTGGTGTACCTGTTTGGAGACTCCACGGTGCGCCAGTGGTTTGAATACCTGAATGATGTGGTTCCAGACCTGAAGGAGTTCCACCTAGGTAGTCCAAAGAAAGTGGGGCCCTTCCTGGCAGTGGACAGTGTGCATAACATCATGTTGAACCTGTACAACAGCGACTGGTTCTCCCTACAGCTGGACTCCGTGCTTCGCAGCATGTTCCGCGGCCTGGATGTGGTGCTGGTGGATGCCTGGGAGATGACCCTGGCACACTACCTCCCCCATGCCCTCCACCCACCCCCCATCATCATCAAGAACCAGATCGACGTCTTCCTCTCTCATATCTGTCACGACCGCAGGAGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014417 True 3288 mRNA 0.46 6 13276573 13284294

Neighbor

gene id symbol gene type direction distance location
AMCG00014414 NA coding upstream 2270 13266017 ~ 13274303 (+)
AMCG00014405 NA coding upstream 30939 13240840 ~ 13245634 (+)
AMCG00014406 NA coding upstream 36463 13239073 ~ 13240110 (+)
AMCG00014401 tfg,LOC102777061 coding upstream 210596 13057865 ~ 13065977 (+)
AMCG00014400 NA coding upstream 235629 13029886 ~ 13040944 (+)
AMCG00014416 NA coding downstream 7035 13291329 ~ 13301873 (+)
AMCG00014415 eed coding downstream 39073 13323367 ~ 13331090 (+)
AMCG00014419 NA coding downstream 55893 13340187 ~ 13360020 (+)
AMCG00014418 NA coding downstream 77454 13361748 ~ 13371376 (+)
AMCG00014420 NA coding downstream 165804 13450098 ~ 13451219 (+)
G69833 NA non-coding upstream 294139 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 676260 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1492490 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1553806 11719318 ~ 11722767 (+)
G69681 NA non-coding upstream 1635121 11641083 ~ 11641452 (+)
G69959 NA non-coding downstream 49920 13334214 ~ 13335185 (+)
G69961 NA non-coding downstream 68039 13352333 ~ 13380404 (+)
G70054 NA non-coding downstream 410521 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 883152 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 1182410 14466704 ~ 14467744 (+)
AMCG00014407 LOC107725344 other upstream 24841 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3124660 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3267925 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5794013 7464503 ~ 7482560 (+)
G68848 NA other upstream 5859979 7413640 ~ 7416594 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 370944 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 905270 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 1018153 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1937620 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 2391337 15675631 ~ 15685899 (+)

Expression


Co-expression Network