AMCG00014418


Basic Information

Item Value
gene id AMCG00014418
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13361748 ~ 13371376 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014418
ATGggGGTCTGCATTGATGGTCTTGGGACCTTCACCTTCTCTCAGAAGATTGATACGGGAAGTCAGAGACCCGTATTTCAACTCTCTGAAAAGGTTTCCCAAAAGCATGGCTTAAAGCAGGTCAAGATGCTTGCGGCAGGTGACGTGCCGGTGGTCCCTCTGAACTACACGGCGCTGTCATGGGGGACCCCATTCGATCGGGACACGGTTGAGCTCTGCATTCATGagactctgctgctgctgcaccgCTGTGCTGCATCCCAGCGCAGCACCCACTTCAACTTCCCTGGGATCGGTGTGCTGTCTCTGTGCCAGGGCACCGTCAAGATGAGGTTCTACAAGGACTTTCTCAAAGCCATGGACGGCAGTGGCAACCTCACACAGGCCTCTCCAAACGAGGTGAGGCAGAGGATCCGCAGACCAGCTTGTCAGCCGGCTCGAATCAACATTCAcgaggagctggagaggagcCCGAAGTCCACCGCAGCACATGAGAGGCAGGCAGACAAAGGgCAGAGACTCGGCTCTTCTGTATCATCTCCGTGTCGTTTCCCTAAGCTAGAGCAGAAGGCACTGGTGTCCAGTCCTCCCGTCCCCAGGGGCTCTGAATGTGCCAGCCATGACCACGCAGGACAGGAGCTGTGCTACGTGTGTATGCAGAGGGCCCAGCGCAATGTGCCCTTCTacgtgagagaggagaggaagaggcagGAGAAGGAAGATGAGAGACTGCTGATGATCAAGCAGCAACAGGAACTGCTAGAGGAACTACAGCAAGAGCAGGATAAACTACAGGCCGCCAGAGAACAAGCCCAGAAGGTTGCTGCCATCAATCTGAGCCTCTCTGAAGCCGCAAAAGGGAGGAAGCCTGCGAGCTCCACGCAGAACTCCTTCATCTTCCCGAATCGGCCCCTGACACCCCCACACGACCCAAAGCAGCAGCACTACCACCGGAAGCTGAATGAACAGATCAGGCAGAGGAAGGAAATGGAAGCCCAGAGGAGGAAAGACAAGGAGCTCAGAGAACGGCGCCGACAGGTTCAGCTTGCTCAGGAaATTGCAGCCCTGAAAGAGCAGAATTGGAAGAAGAAAGCTGAGGAAATCCAAAAGTACAACAAGGCATTGGATATGCAGATTGAGCAGAAAAGGCAGAGAGAAGGGATACCAAACAGGATCAGCGTCAGGTTTCCGAGCATCCACCCAGAGAGGGTGAAGGTAAAACCATCAGGTCTACCCACCCACGAGACAGATTCAGAGGGGCTCGTCTTTGGGGCCTATGACACCACCTACCAGGATCTGCAGGAGCAGAGGAGGCGCGCACGCCAGCTGCAGAAGGAGCATCTGGAGACGGCCACCCAAAAGAAGAGAGAAGCAGTCTTCAACCACATCCTGGAGCAGAAGAAGGAGCAGGAGGTGTTCAAAAGGACCAGGAAGGAGCTGGAAGCAGATCAGATCGCTCACCATGAGAAGCTCCACAGCATGCGCGTGTGTCTGGAGGACGACTGGGCCCACAGCAAAAAAGCCAAATGCGTCAGAAATCAGGAGGAGCACAGTTATATTAGGTCTGGCAGCCGTCAGCTATTGGAACAGTGTGAGAAGTACCGCCGCTGCTACCAGTGTAAGAGACGCAGCACCAACCATGGAGAGTCCAACCTCTTTATGCTCTCCAAATACACCCCTGGATCATGCCTGATGAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014418 True 1701 mRNA 0.55 13 13361748 13371376

Neighbor

gene id symbol gene type direction distance location
AMCG00014419 NA coding upstream 1728 13340187 ~ 13360020 (+)
AMCG00014415 eed coding upstream 30658 13323367 ~ 13331090 (+)
AMCG00014416 NA coding upstream 59875 13291329 ~ 13301873 (+)
AMCG00014417 NA coding upstream 77454 13276573 ~ 13284294 (+)
AMCG00014414 NA coding upstream 87445 13266017 ~ 13274303 (+)
AMCG00014420 NA coding downstream 78722 13450098 ~ 13451219 (+)
AMCG00014422 NA coding downstream 219544 13590920 ~ 13615018 (+)
AMCG00014421 NA coding downstream 259291 13630667 ~ 13650074 (+)
AMCG00014424 NA coding downstream 372745 13744121 ~ 13747498 (+)
AMCG00014426 NA coding downstream 378297 13749673 ~ 13788076 (+)
G69959 NA non-coding upstream 26563 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 379314 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 761435 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1577665 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1638981 11719318 ~ 11722767 (+)
G70054 NA non-coding downstream 323439 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 796070 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 1095328 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1808469 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1979266 15350642 ~ 15430852 (+)
AMCG00014407 LOC107725344 other upstream 110016 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3209835 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3353100 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5879188 7464503 ~ 7482560 (+)
G68848 NA other upstream 5945154 7413640 ~ 7416594 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 283862 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 818188 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 931071 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1850538 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 2304255 15675631 ~ 15685899 (+)

Expression


Co-expression Network