AMCG00014421


Basic Information

Item Value
gene id AMCG00014421
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13630667 ~ 13650074 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014421
TCGAAGGCTGTGACAGGTGGTGTTGGCATGGCGTCTCACGATGACAGTGAGCAGGTGGTACCTGAGGAAGAGGACAGTGCGAGTGTGCTCTCAGTGCAGGCCAGATACCTCCGCAGCTCCTCTCCCAGCAGGTTCTCCATTATGTCTGACACGGACACCGAGAGCATTTTCATGGAGCCAATTCACCTGTCATCTGCTGTGGCTGCCAAACAGATCATAAATGAAGAGTTGAAACCCAAGGAGGTAAGAGTGGAGACCATGACTGAGGGTATGATGGAGTCAGCAGAGCAGCTTCTGGTGGAAGACCTCTACAACAGGGTGAAGGATATGATGGATGACAGCAGCCCCTTCAACACTCCCTGTATCCTGGACATCCAGAGGGCTCTCACCCAGGATAAGCTGGAAGCACCCCTCAACCCTGTGGATGAAGTTTGGCCCAACATCTTCATTGCTGAGAAggCTGTGGCTGTGAACAAATCCAGGCTGAAGAGACTGGGGATCACTCACATCCTTAACTCAGCCCACGGCACTGGGGTGTACACAGGAGCTGACTTCTACTCTGGCATGGATATCCAGTACATGGGCATTGAGGTGGATGACTTCCCAGAGATGGACATCTCCCAGCATTTCCGTCCAGCTGCAGAGTTCCTGGATGAGGCTCTGCTAACCCACAGAGGTAAAGTCCTCGTGGACTCGATGATGGGGGTGAGCCGGTCTGCAGTGCTTGTGGCTGCCTACTTGATGATCTTTCACCACATGACTATAATGGAAGCCTTGATGGCTATGAGGAAGAAGCGCCCCATCAACCCAAACGAGGGCTTTGTGAAGCAGCTCAGGGAGCTAAACGAGACCCTCCTTGAAGAACGGGGAGGTTTGGAGGATGACGACAGTGACACTCTGAGCCAGAGCTCTGTCATTGAGGCTAAAACCCATGCTCTCAAGGCAGAAGAAGGGGAATTAGGGAGTATTATGGGAGCAAAGGTCCACTCCATCATGGTGGAGGAAGAGGACAAGATGAGCACTCTGAGTAGTGTCATGACAGCAGCAGCGAAGGCCAGTGTGGCTTCCAAAAGACCCACACTGATagatgaggatgaggaggatAAGTTGTATGAGGAATGGAGGAAGAAACAAGGCTTGCCACCTATTGAGAAACCAAAATCGAATGAGGGTAAGATACTCAGGCTGCCagaaggggaggaagaggaagatgtGGAACAGGTGATTAGGGAGTGGCAACGGAGAAATGAGAAGTACCAATCAGAGGACTGGTGGAAGGCTCAGCTCATGTGTGAAGATGAAGAGTCTCTCCTGGGAGGCAGCTCTTTTTCTGCCAATGGCCATGATGATGCAGAAAGTGTCAACAGTATGGACATCCGGGCGCTAAAAGAACGTTTAGCAGCCAGTGGCATTGGTAGAGTCAGAAGTGATTCAATCTCGACTGAAGACAGTACAGCAGATATTTGGACAAAAAGACTCCGGGAGATTGAAGAGCAGGCCGCAGCGAGGTATGGCGACAAAGGCAAGGACACCTGTGAGAATGGAAGCAGAGAGAAGGACATTGACGAAGAGAGCCTTTTTTCAGAAACCAGCTCTTTGTACAACttctgcaagaaaaataaagacaagctCACGCCTCTAGAGAGGTGGAGGATCAAAAGGATCCAGTTTGGATGGAACAAGAAGGATGCCGAAGGTGAGAAGGCAGAAAGCAACAGTGTGCACGGGGAAGGGGAAGAAACTAAAGTAACTCCACAAGATGTGAACCTGACCGCCTACCAGAGCTGGAAACTAAAACAGCAAAAGAAACATGGCACTGAAAACAAGGATGAAATTGTGGAGCTGAGCAAGGGAGAGGATACGGCTTCCATCAAGAGAAAGCAAAGACGAGCTGAGCTCTTAGAGCGTTCCCGGCAGACATTGGAGGAGAGCCAGTCCATCTGTGGGTGGGACACAGAGAGTTCCATGAGTGGCAGCATCCCACTATCTGCAATTTGGCCTAACATGTCCGTGAGGAGTGTCAATGATGATACCACATCAGTGCTGAGCATGCAGAGCAACAGATCATCTGTTTCTCAGGCCAGGAGTTTGCAAGGCCTTCCCCAGTCCCCAATGGTTCCCTTGCCAAACATTCAGGTCGGCAATGATGATACCGTTTCCCTGGCGAGCATCCAAAACTGGATTGCCAATGTGGTAACTGAAACTAtcattcaaaagcaaaatgaaatgaTGATGCAAGGCAGCCTTCCCCCAAGTCATAGTCCATCTGTCATGAGTATGGGAGCCAGATCTGGTGCTGCTTTAAAATATGCAGATGATGATAAAATATCACTTCTGAGCATGCAAAGTGGAACATCTCACACAAGTTCCATATCACATCAGAGAGAAATACGAAGTTCTGACAGCCACTCAGCAATGTCATGTGGCAGCTTATCTAACATAAAGTCTGAAGGATATGGTGgctccaaaaacaaaattacacgCACCAGCAAGCCCCTCTACAGCCTGTTCGCAGATGATGTTGACCTCAAGAAGTTGGACAAGAAAGACAAGGaaatgaaatctgaaatgaGAGGCAAAATGTCTGTATATGAGCTAGAAAAAATAGCTGCTGATAACAAGCGCAGCACCTTGTTCAAGAAAAAGAAGGCAAAAGATGACAGTGAAGATGAGGATGACACAGCTAGAACCTCCAGGAAATTATCTTCCACCAACGTTGACAGATCTGATAATGTATCCAGTATTTCTGGGCTCTCTGCAAGATCCATCACAGAAACCCCAGACAAATCTCCCAGCATTAACAAGTGGCTCAGTGACGTCAACGCTCCCTCCAGATACTCTAAATCTTACATTGGAGAAAGCTCTGAGGCTAAATTCTCAAGATCATCATACTCCAAAGGAGACACAACTGAGTCATCAGATTTCATGTCCTCCAGACAAAGAAAGGAATTCTCTGGAAGCTCCTTCACCAGTCCAGACAACGGTTACAAAACAATATCACGGTTCTCTTCTGCGACATCTTCAAAAACTGCAGATTTATATTCCTCCAGCAGGTCCAGGGCTGACGATTATGAAAATCACAGAGAAACAAGTCCAGAACTGTATGGTACTATGAGATCACCTTCACCAGCCGCTGACTTGACTGaaacacaggaacacagaaCACGGGCCTTCTACTccactgaagaagaagaagagttTGAAGATAAAGAACTATTTGAATATGGAGCTAAGAGAAAATTCACCCAGAGTTTTTCAAGGTTCGAAGATAGTGAtggagaaataaagaaaagtggCAGTGATGAGGAGGAAGACGCATCTATAACCAGGTGGTCCAGGATAAGATCCAAACCCAAAGAAGATGAGGAAGATGATGATGAGGTAATTGCTGCTTGGAGGAGTCACCAGGAGTCAAAATCAAGGACTCAAAGAAGAAGAGAAATATAA

Function

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014421 True 3447 mRNA 0.48 5 13630667 13650074

Neighbor

gene id symbol gene type direction distance location
AMCG00014422 NA coding upstream 15649 13590920 ~ 13615018 (+)
AMCG00014420 NA coding upstream 179448 13450098 ~ 13451219 (+)
AMCG00014418 NA coding upstream 259291 13361748 ~ 13371376 (+)
AMCG00014419 NA coding upstream 270647 13340187 ~ 13360020 (+)
AMCG00014415 eed coding upstream 299577 13323367 ~ 13331090 (+)
AMCG00014424 NA coding downstream 94047 13744121 ~ 13747498 (+)
AMCG00014426 NA coding downstream 99599 13749673 ~ 13788076 (+)
AMCG00014425 cul4a,LOC102780633 coding downstream 141075 13791149 ~ 13813879 (+)
AMCG00014427 NA coding downstream 170282 13820356 ~ 13827551 (+)
AMCG00014439 LOC107748345,LOC107577958 coding downstream 232645 13882719 ~ 13903655 (+)
G69961 NA non-coding upstream 250263 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 295482 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 648233 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 1030354 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1846584 11783865 ~ 11784083 (+)
G70054 NA non-coding downstream 44741 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 517372 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 816630 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1529771 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1700568 15350642 ~ 15430852 (+)
AMCG00014407 LOC107725344 other upstream 378935 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3478754 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3622019 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 6148107 7464503 ~ 7482560 (+)
G68848 NA other upstream 6214073 7413640 ~ 7416594 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 5164 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 539490 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 652373 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1571840 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 2025557 15675631 ~ 15685899 (+)

Expression


Co-expression Network