AMCG00014422


Basic Information

Item Value
gene id AMCG00014422
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13590920 ~ 13615018 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014422
GACAGAATTGTAAGCTCACCATGATCCTCAGTCTACTTCTTCTCACCCTGGCCTGTATCAATGCGAATGCAGAGCTTCAGCCTTCTGGATTTAAAGAAGATACTGCTCTGCTGCCTGCCAAACCCTACATCGAGTCCTGCCGCTCCCCGAACCAGGAGACGTTCACCTGCTGGTGGAGCACCGGGGACCGAGGCGTCGAGAGCACCGGCAACACTACCTACACCTTTACCTACACTGAGGAATATGGGCCAAAGAAAGAGTGTCCAGACTATGTGACGGGGGGCAAAAACAGCTGCTACTTCAACAGCGCTCACACACAGGTGTGGGTAGACTACTGCATCAACGTGACGGCGACAAACCGCTACGGCTCGCAGACCTCTGAAGAGTTCTGCCTGGATGTGGCTGATATAGTTGAGCCTGACCCACCATTCAACCTGACACACTGGTTTGTCAACAGCAGTCAGGAGGGCTCGGGGCAGACAGTGGTGTTGTCGTGGCATTACCCCACCACGGCAGATGTGCAGGTCGGCTGGCTGACGCTCGTTTATGAAGTGCAGTTCCGTCGCAGCACTGAGCCCAACAACTGGAAGGTAAAAGGCATCCTGAGAGAGCAGAGGCTAGAGGTCCTGGACCTGCCAGCAGGGAGCTACATATTTCAAGTGCGCTGCAAATCCAGGAACTCGGGGCTGTGGAGCCAGTGGAGCAGCCCTCTCACTGTGACTGTCCCTCCCACACAGGGCATAGATAAGATGCTGTCATTGATTCTAGTCTCTGTAGTTGGCATTATGGCTTTCTTGATCATTGCTTTTGGTGTGATACCTCGGAGAAAAAGGATTAAAGCCTTTCTCTTGCCTCCGATTCCTAAACCCAGAATCAGAGGGATTGATCCAATGCTTTTGAAGAAGGGCAAGATGGATGAAATTGACCGTCTATTTACCTCCTTCCATGGATACAACCCCCCTGAGTACAAGGAGGAGGCCTGGTTTGAGGTGAGCACAGATGAGGGGCTTTCCTTCAAAGACAGTCCTCTGGCCAAGATggtgaaggaggagagagagaggacgccCAGCCTTCAGCCCCAGAACCAACCTTTCTTGGTTGTTGGAGCAAAGGAGGAGCAGATGCTATTGCACAAGCTGGAGGGTTCCAGTAGTATTGAAGCAGGCCAAGGAAGCCTCAGCAAGGAAGAGCCAAGTCCCTTGAATCCAAATGACACCCCCAACTGGAGCAGGCAGACCCAGGTGGCCATGGAGAAATCCTTTGAAACCATCACCAACCCCATGGGCTACAGCATCACACTCAGTCCCACCAAAACCTTGAAGGCCAGCCAGGATTTTTACACCTGTGTAAACACAGTGAACAACAATGGGACAATCCAGCTTGTTCCCTGCTTTCCAGACCATGGGCAAAAATCACCCTATCTGGAGCTACGGGATGCTTCTGGAAATGCTGACAAGGCAAAGCAGCAAGAGTTGAAAAATATAGCAGACAAAAACAATCAGATGCAGAGCAAGCCCAAGCCCCACAATCTGGCATCTAACAAACTCAAAGTTGGGGCTGCAGAAGAACGAGAAAGTTACACTACAGTGGAGTCTCTGCATCTTCAGCAAGGTCTTTTTGCGTGTTCGGTTTCGCCTGAGGAGAAATCGCTGTACAAGTTCAACCACTGCAATGACTACTTATGCATAGAGCAGAATGAACTTGCAGTGCCTTTGCTGCCAGCACCCATAATGAAGAAGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014422 True 1742 mRNA 0.51 8 13590920 13615018

Neighbor

gene id symbol gene type direction distance location
AMCG00014420 NA coding upstream 139701 13450098 ~ 13451219 (+)
AMCG00014418 NA coding upstream 219544 13361748 ~ 13371376 (+)
AMCG00014419 NA coding upstream 230900 13340187 ~ 13360020 (+)
AMCG00014415 eed coding upstream 259830 13323367 ~ 13331090 (+)
AMCG00014416 NA coding upstream 289047 13291329 ~ 13301873 (+)
AMCG00014421 NA coding downstream 15649 13630667 ~ 13650074 (+)
AMCG00014424 NA coding downstream 129103 13744121 ~ 13747498 (+)
AMCG00014426 NA coding downstream 134655 13749673 ~ 13788076 (+)
AMCG00014425 cul4a,LOC102780633 coding downstream 176131 13791149 ~ 13813879 (+)
AMCG00014427 NA coding downstream 205338 13820356 ~ 13827551 (+)
G69961 NA non-coding upstream 210516 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 255735 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 608486 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 990607 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1806837 11783865 ~ 11784083 (+)
G70054 NA non-coding downstream 79797 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 552428 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 851686 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1564827 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1735624 15350642 ~ 15430852 (+)
AMCG00014407 LOC107725344 other upstream 339188 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3439007 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3582272 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 6108360 7464503 ~ 7482560 (+)
G68848 NA other upstream 6174326 7413640 ~ 7416594 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 40220 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 574546 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 687429 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1606896 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 2060613 15675631 ~ 15685899 (+)

Expression


Co-expression Network