AMCG00014435


Basic Information

Item Value
gene id AMCG00014435
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13828455 ~ 13846485 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014435
gtgagaAAGTGCGGTGGAGGAAAGACGGGGATAGAGAAGCCGCTCCTCGGCTCTGCTACAAGTCATGTCTGAGAAAGTCTTTCGTATGCAGGGACTCAGCTCGCACAAGTGAGAAGACATGCGAGTCAGTAGTTGGCAAAGGTGAAATACGGCAGGTGAAAGTAAACAACGTCCGCTGTCAGCCAaccagacagtgtgtgtgtgtgtgtgtgacggtTAAAACTTTTAATGATACCGTAGTTTATTTACATCCAACCAACAACCTGATGGCAGCTACATGTGGATGATGCATTATTCAACCCCAGTGGACGTGTGCACAGTACCTAAATAGAGCCTGCACGTTTGTTTGGCATTTTACCCCACAGCTGGGATGAACTTTGGAGCCGCCACTGAGCCATGGCTGCGACCTCAAGCCCTTCCTGGGATGTGCTGCTGTTGCACTTGACTGGCAGGCTGCTGTAGATTCAACTCGGGCCACAGCTGCTGAAGTTCACCCATTTGTCCAATATACCGATAATCGGGGGAaaccacttttatttttccccccagatCATTTTTTCCCCACCTGTATACGTTTCTCCGTGCGCTCGTTTCAATGGAGAGTAAAGCCAATGGGACCCGGGCAGCGCAGCACAGCCACGAACAGGGAAACAGTGCGAGAGACCGGGTGCAAAGGATTGATCCGTATGGCTTTGAGAGATCAGAAGACTTTGATTATGACTCCTATGAGGAGTTTATGTCCGTCTATCTCACCATCCTCACCAGGAGATCGATCAAGTGGTCCAAGCTCTTACAGGGAAACAGTAAAGTGGAGAGAAACTTAAAAGTGAAGAGATATGTACGGAAGGGCATTCCAAATGAACACCGCACTCTCATGTGGATGACGGCCAGTGGCGCTCAGGAACAGATGGACAAGAACCCTGGATACTACGGCAAGCTCCTGGAGGCCGAGCATGACCCCAGACTGGTAGAAACCATCAAGACAGacttGAACAGAACGTTTCCAGACAATGTCCAGTTCCGCAAAACTGCTGACCCCTGTCTACAGCAGACACTGTTTAATGTGCTGGTAGCATATGGCCATCACAACAAGAATGTGGGGTACTGCCAGGGCATGAATTTCATCACAGGATACCTGATCATCATCACCAAGGATGAAGAGAAATCCTTCTGGTTGCTGGAAGCTCTCCTGGGGCGTATATTACCTGACTACTACACCCCTGCCATGATGGGGCTGAAGACGGACCAGGAGGTGCTGGGTGAGCTGGTGAGGATGAAGGTGCCAGCAGTGTCCCAGATCATGAACCAGCACAACGTGATGTGGACGCTGGTTGTGTCGCGCTGGTTTATCTGCCTGTTCATTGACATCCTGCCCGTGGAGACTGTTCTGAGAATTTGGGATTGCATGTTCTACGAGGGATCAAAGATAATCTTCCGCGTGGCCTTGACATTAATCAAGCACAACCaggccacaatcctgcaggccAGAAACTTCCCCGATATCTGCGACAAGTTCAAGGAGATCATCAAGGGGGAGTTTGTGGAGGACTGCCATGCGTTCATGCAGAAAATCTTCACAGAGCCTGGAAGTCTCTCCATGTCGACCATCAACAAGCTGCGAGAGACGTGCCGGGCCAGGATCATGGCCCAGGAGTCCTGAGTGTCTCGAGACAAGATGGAGGAGTTAGATTATGTAGTAATATTCGAAACATTCCTACCAGATTTGCACCGTGTAAACCTTTACCAGCTTCCATGACTGTTAGATACCTGACCAGTTTACGGCCTTCTGGAAGATTGTGTTGTATATAGTGTATGAATAGAgtgcatatattatattatatatatcacacacattttacaaaatgactgattatataaatgtgcatttgtgATTTTTACTGATCTTGACTAGTCTTAAACCACAGAGGGAAGGGAAGATTTGTAATCAGTAGAAAAAGGAACCTTTCCTTTTGGTCTTTGTACGGTTGCACTTTGTCAGAATagaatgtaactttttttttttttttttttttggagttgTAATATGGCTTTAATAAGctattt

Function

GO: NA

KEGG:

id description
K19953 GRTP1, TBC1D6, MSB3_4; TBC1 domain family member 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014435 True 2064 mRNA 0.47 8 13828455 13846485

Neighbor

gene id symbol gene type direction distance location
AMCG00014436 pcid2 coding downstream 38320 13784915 ~ 13790135 (-)
AMCG00014428 NA coding downstream 85636 13728703 ~ 13742819 (-)
AMCG00014429 NA coding downstream 119168 13697335 ~ 13709287 (-)
AMCG00014430 NA coding downstream 292086 13531195 ~ 13536369 (-)
AMCG00014438 NA coding downstream 300853 13498726 ~ 13527602 (-)
AMCG00014431 adprhl1 coding upstream 6677 13853162 ~ 13864850 (-)
AMCG00014433 dcnl2,dcun1d2,dcun1d2a,LOC105908025,LOC108426072 coding upstream 20158 13866643 ~ 13882123 (-)
AMCG00014450 NA coding upstream 77114 13923599 ~ 13929423 (-)
AMCG00014452 NA coding upstream 119132 13965617 ~ 14002734 (-)
AMCG00014451 NA coding upstream 158706 14005191 ~ 14041867 (-)
G70094 NA non-coding downstream 56183 13770177 ~ 13772272 (-)
G70091 NA non-coding downstream 67035 13759226 ~ 13761420 (-)
G70063 NA non-coding downstream 131484 13694757 ~ 13696971 (-)
G70034 NA non-coding downstream 205074 13623115 ~ 13623381 (-)
G69973 NA non-coding downstream 452576 13304426 ~ 13375879 (-)
G70169 NA non-coding upstream 73036 13919521 ~ 13921330 (-)
G70238 NA non-coding upstream 252879 14099364 ~ 14102156 (-)
G70315 NA non-coding upstream 1199367 15045852 ~ 15059774 (-)
G70346 NA non-coding upstream 1392318 15238803 ~ 15242333 (-)
G70402 sucla2,LOC107705569,LOC107584790 non-coding upstream 1527753 15374238 ~ 15376774 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 694704 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 2160918 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 2691369 11125029 ~ 11137086 (-)
G69537 NA other downstream 3030308 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 3767225 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 2875588 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 3600383 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 3742782 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 4144166 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 5355318 19201803 ~ 19203567 (-)

Expression


Co-expression Network