AMCG00014443


Basic Information

Item Value
gene id AMCG00014443
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14138406 ~ 14143073 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014443
TGACGTTTGACGTACATGATTGGCTGTTGCGGGGGTCTAGGGCTTGTCACTCCACACACCGGAAACTCTGAACAATACGAAAAATGGCCGTGGCAGGAAAGTAGTACCAAGTGGTAAATGGGCTGATAATGAAACAATTTTGAAACGTCTGTAAGAGCCTACTTCAAAGAATCAAAATGACGTCCATCATAGAAGTAAGAGCTCCACCCACGGTGTCTTTACGTGGTCCTGGAGATGGCATGGAAACGGACCAGCTGCCTACCTCCCTGGAAGTCACCACTGAGCTTGCCACCAAAATCAGCCCCCCACCACTCAGCCCATGCACAAAACCCACTCCACCACACAACCCTGGGGTCCTCCACCTGGGCAAAGTTAACAAAGATTCCTGCACTGAGCTAGAGGCCATCCGCATTGTGGTCCCCAGAGCGGCCATCTCCCATTATGTGCCCACAAAGGGCTCCAAGCTATTGGACTCTGTGTCAGGTGGAGTGAAAGGGGAGCCCCTGCTGCAGCCCGAAGTTTCAGTGGATCCCAGAAAGGAGGCCCATGACTGGAGGGCTGCTCTGGACAAGCTGCAGAACTCCGAGAGGAGGCTGCTTCAAGACAAGGAGGGCCTCTCCAATCAGCTGCGGGTGCAGACTGAGGTGAACCGGGAGCTGAAGAAGCTGCTGGTGGCGTCTGTGGGGGATGACCTGCAATATCACTTTGAGCGCCTGGCCCGGGAGAAGAACCAGCTCACCCTGGAGAACGAGACGCTGGGCCGCAGCCTGTCCCAGACCACCGAGCAGCTGGAGCGCATGACCATACAGTGTGATGTTTGGAGGAGCAAGTTCCTGGCCAGCAGGGTGATGGCAGAGGAACTCACCAATGCCAGAGTGTCTCTGCAGCGACAGGTGAGGGAAGCCCAGGGTGCCCTCCAGGACCTTCTCTGTGAGAGGGAAGAGTTCTCTCAGGATATGGTGCACACCCACAGGTCTCTGGAGCAGCTCCTGGTCTCTCTGCAGTGGGGCAGACAGCAGACCTATTACCCGAGTGCTCAGCCACTCAGCACTGGAGAACTAGCATCAGCCAATCACAAGTTAGCAAAGGCAATCAATTCTCACCTTTTGGGAAATGTAGGTGCCAGCAGTGCCCAGAAGAGCTCTCCGGCCTCAGAAATTTGTAACACCCCAGCTGAAAAAATGGCAGAAAAGGTGCTGAGAATTCTGGATCCTGTGTCAGTTGCTGAAGATGCTTGTGACCATTCTCTTCCTGAATCGTCACCGACAACCTTTCTCTCCAGCAAGAAGAGCATTGGAAGATTTCATCCATACACCAGATATGAGAACATCACCTTCAACTGTTGTAACCACTGCAGTGGCGAGCTCATTGTGCTTTAAATCCTcatttgtttactgtatttggtttggtttaagGTCATTCATATGTAAAAAGTGCACTATAGTCCATTCAAGTACCCAAAACATGAACTATAGACTCTTTCACCAGCATCCATAAGCGGTTAAGAATTTAACGGATAACCTAAAAGGAGCACAGtgcattaaaacatgtatttatatacttatactTTTTAGAGAATGTATCTATCCGATAACCCCTTTCTGAGGATGGCATCTATTTCTCTGTGTACTTCACCTAAGAAAATAATGGATTTTCAGGTATTTTTTGTTAGTCTTATATCTGGTAAAATGAGCATGTGCTAAGGGCAGGTACAGCTGTGATAAAGTACTGAGAAAACACGTGCTCTGTTCAAACCTTGCCAGTTTTTAGCTGAGATCATGTTTAAGTTGTAAGGATTATGGAAGAAAAATTGGATTGTTAACTGGATAGTGTGACTGATATCAGAACATTTCTCAATGCTTTCAAGTCTGTGATAGTGGCCCAACTATCAATATGtcttaaatacacattttaaagggtTGAATATGTATTACTTCTGCAAAGAGGAGGGTGATGGGGCCATTAATCCCAGAAAGTTCTATTTTCATATAGTATATGAACTTTGAGAATCTAGTATTCAAATTCCTCTGTTACAATGTTTCAAGTGCAATAAATGGACAGAATTGAGTATAGGTGCTAACTGCAATATATAACGCAGCTCGTGGCTGACTGGTTTGAGGAGGTGGAGTCTAATGTGTACTCCAAACGATGTTTTGAAAACGTATTACTGTGTAAAtggtacaataaaatatttatttataaaaaaaaattagtttgtatttatagtGTATGTGTAAAAGTTTTAAGCCACATAATTTGACATTATTCTTGGATTATAGATGTTACACAGAAGGGATGTTAATTAAACGTGTTGATAATGTCAACTAAATCCATACATTACTGGCATAATAGGACTGGAGGACtagtg

Function

GO:

id name namespace
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014443 True 2368 mRNA 0.45 7 14138406 14143073

Neighbor

gene id symbol gene type direction distance location
AMCG00014444 tpp2,LOC107665822 coding upstream 32912 14085512 ~ 14105494 (+)
AMCG00014442 NA coding upstream 173283 13944780 ~ 13965123 (+)
AMCG00014441 grk1,grk1a,LOC107748333 coding upstream 199301 13930882 ~ 13939105 (+)
AMCG00014440 tfdp1,LOC108266453,LOC108426071,LOC107597491,LOC107748134,LOC107673714 coding upstream 217076 13905849 ~ 13921330 (+)
AMCG00014439 LOC107748345,LOC107577958 coding upstream 234751 13882719 ~ 13903655 (+)
AMCG00014445 cpox,LOC107717573,LOC107585846,LOC107657924,LOC107550392 coding downstream 8226 14151299 ~ 14157726 (+)
AMCG00014446 NA coding downstream 17563 14160636 ~ 14160842 (+)
AMCG00014447 NA coding downstream 19052 14162125 ~ 14163322 (+)
AMCG00014458 NA coding downstream 80443 14223516 ~ 14235412 (+)
AMCG00014460 NA coding downstream 94938 14238011 ~ 14241495 (+)
G70054 NA non-coding upstream 441535 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 758002 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 803221 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 1155972 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 1538093 12600104 ~ 12600313 (+)
G70221 NA non-coding downstream 24373 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 323631 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1036772 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1207569 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 1307705 15450778 ~ 15451268 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 449218 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 886674 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3986493 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 4129758 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 6655846 7464503 ~ 7482560 (+)
AMCG00014456 NA other downstream 46491 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 159374 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1078841 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 1532558 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 1986406 16129479 ~ 16139032 (+)

Expression


Co-expression Network