AMCG00014450


Basic Information

Item Value
gene id AMCG00014450
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13923599 ~ 13929423 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014450
atggCGACTCTGAAAGAGAAGCGAACCTGTGGCCAACGATGCGAAGACTTTGGGCACTTTGTGTGGAACTCAGAAAACAAGACTCTGATGGGCAGGTCTCTGGTGAAATGGGTCTATATCAGTCTTTACTATGTGGCCTTCTATATTGTGATGACCGGACTATTCTCCATTGCCATTTATGTTATGATGTCAACAATGAATCCATATGCTCCCACGTATCAAGACCGGTTAAAATCCCCAGGAGTGATGGTCTGGCCAGATGTCTATAATGACGATGATCTGGAGATTGTCTACAACAAGTCCGATAAAACAAGCTGGATGAAGATGACCAAGATCCTGAAGGACTTTCTAGCACCCTACAATGAGTCCGCTCAAATCCACAACAGTTTCACTTGTACGAAGGGCAAGTACAACATCCAGCACAAGTTTGGGGAGCATCACACCGTCTCCTGCGCTTTCACCGATGAGATGCTGGGGAACTGCTCTGGGATAACCTACCCCACTTTTGGGTACCCGGACGGGAGTCCATGCTTCATCATCAAAATGAACAGGATTATTAATTTTCTGCCTGGAGATGGAGTTGCTCCTTATGTCAACTGCACTTTGGCGGAGGGCAGCTCGTCCAGTTTTGACGGATTTGAGTATTTCCCAGCAAACGGCACCTTTGACATGTCCTACTTTCCCTATTATGGCAGGAAGGCTCAGCCTAGCTACACAAACCCTCTGGTTGCAGTGAAGTTACACAACGTTAAGGTGGACACGAAGCTGAAGATTGAATGCAGAGTGGTGGCCAAAGACATCTCCTGTGATAACTTCCACGACCCCTACGAGGGCAAGGTGGTATTTGGACTCAAGATCATCCAATAG

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process

KEGG:

id description
K01543 ATP4B; H+/K+-exchanging ATPase subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014450 True 867 mRNA 0.47 7 13923599 13929423

Neighbor

gene id symbol gene type direction distance location
AMCG00014433 dcnl2,dcun1d2,dcun1d2a,LOC105908025,LOC108426072 coding downstream 41476 13866643 ~ 13882123 (-)
AMCG00014431 adprhl1 coding downstream 58749 13853162 ~ 13864850 (-)
AMCG00014435 NA coding downstream 77114 13828455 ~ 13846485 (-)
AMCG00014436 pcid2 coding downstream 133464 13784915 ~ 13790135 (-)
AMCG00014428 NA coding downstream 180780 13728703 ~ 13742819 (-)
AMCG00014452 NA coding upstream 36194 13965617 ~ 14002734 (-)
AMCG00014451 NA coding upstream 75768 14005191 ~ 14041867 (-)
AMCG00014455 NA coding upstream 177872 14107295 ~ 14108479 (-)
AMCG00014453 LOC104958986 coding upstream 190423 14119846 ~ 14137980 (-)
AMCG00014448 NA coding upstream 214740 14144163 ~ 14147502 (-)
G70169 NA non-coding downstream 2269 13919521 ~ 13921330 (-)
G70094 NA non-coding downstream 151327 13770177 ~ 13772272 (-)
G70091 NA non-coding downstream 162179 13759226 ~ 13761420 (-)
G70063 NA non-coding downstream 226628 13694757 ~ 13696971 (-)
G70034 NA non-coding downstream 300218 13623115 ~ 13623381 (-)
G70238 NA non-coding upstream 169941 14099364 ~ 14102156 (-)
G70315 NA non-coding upstream 1116429 15045852 ~ 15059774 (-)
G70346 NA non-coding upstream 1309380 15238803 ~ 15242333 (-)
G70402 sucla2,LOC107705569,LOC107584790 non-coding upstream 1444815 15374238 ~ 15376774 (-)
G70407 NA non-coding upstream 1454210 15383633 ~ 15386700 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 789848 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 2256062 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 2786513 11125029 ~ 11137086 (-)
G69537 NA other downstream 3125452 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 3862369 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 2792650 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 3517445 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 3659844 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 4061228 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 5272380 19201803 ~ 19203567 (-)

Expression


Co-expression Network