AMCG00014467


Basic Information

Item Value
gene id AMCG00014467
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14920413 ~ 14989067 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014467
ATGAGATGTGgagatttattgattgattttggaCTGGAAGAGGAAGTGagaatgGAGCTGCACAATGGCATCACAAACCAGCAGGCACTGGTCACAGCCCTGAATGTCAGTGGAGAGGAGATCGCCCAGCAGTCAACTGCGGAGGACGCCATTCTCTTCAAGGAGAAACTGACCGGGGTCAACGCACGCTGGGAGGAGGTCTGTCGGCAGgtggcagagaggaggaggagGTCAGAAGAAGAGAAACACATATCAGAACTGCAAGAAGACCTGAATGAGTTCCTCTCTTGGCTTGAAGAAGCGGAGAGCATTATATCAATTGAGCTGGAGCCCGGAGACACGCAGCAGCTGAACGCTTCCTTAGAGAAAGTTAagTTAAGAGTGGATGAGCTGTCTCCTAGAAAGAGGATATTAAAGGAGCTGAATGACAGTTCAAGGTATCCACATGGTAGCACGGCGCTTACCTCAGAAGAGCACAGGAGACTAGAGACCAGCCTTAAACAAGTCAACGGGCGCTGGACAACGGTGTCCAGAGAGCTGCCTGAGAAGCAGAGAAAAATTGAAGACCTGCTGAAGAGCTTTGCCCAATTCCAGCAGCAGCTCAGCCAGCTGGCCCTCTGGGCTTCCACTACAAAAGACCAACTCGAACTCTACAGACAAGTGGGGATTCCAGGGGCATTTGACACAAAGGAAACAGAAGACGCTGCTCAAGCCAAACAAGCAGATGTGGAAGGAATCCTATCGCGGGGTCATCAGCTGTACAAGGACAAACCAATCACTCAGCCAATAAAGGGAAAGCTTGAAGACCTCAGTTCAGATTGGAAAGCAATCCACATCCTACTCACTCAGCTGAGAGGCAAACCGGACACTGTCATCTCTACTGCTGCTGGTCAAACAGTTACCGTAGTGACAAAAACCCTGGTTACCAAGGAAACCCACATCTCTAAGCTGGAAATGCCATCTTCTCTGCTCATGGAGGTACCAGCCCTGGCTGACTTCAATAAGGCCTGGGTTGAGCTCACCGATTGGCTGTCTCTACTGGATCATATGATCAGAACCCAGATAGTGACGGTGGGAGACCTTGAAGAAATCAATGACATGATTGACAAACAGAAGGCAACATTGCAGGACCTTGACCAGAAACGCCCTCAGCTGGAGAATCTTATTACTGCGGCACAGAACTTGAAAAACAAGTCCAACAATCAAGAGGCACGCGCCATCATCACCGACCGCATTGATAAGATCCAGGTGCAGTGGGATGAGGTGCAGGGACGGCTTCAGGACAGGAGACGACAGCTGCAGGACATGCTGAAGGACTCCAGTCAGTGGCTAGAGGCCAAACATGAAGCCGAGCCCCTGCTGCACAGAGCCACGGCCAAACTGGAGTCATGGAAGGAGATATCCTACACTGTGGAGGCGCTCAAGAAACAGAATACAGATCTGAAGCAATTTGTCAAGGAGCTGCGCCAGTGGCAGATCAACATAGATGTAGCAAATGACCTTGCACGCAAGCTTCTGAGGGATTACTCTGCTGACGACACCAAGAAAGTCAATCTGATGACAGAGAGCATGAACAATTCCTGGGCAAATATCAATAAGAAGTAA

Function

GO:

id name namespace
GO:0006091 generation of precursor metabolites and energy biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014467 True 1605 mRNA 0.50 11 14920413 14989067

Neighbor

gene id symbol gene type direction distance location
AMCG00014466 NA coding upstream 92292 14823792 ~ 14828121 (+)
AMCG00014463 NA coding upstream 109278 14767487 ~ 14811135 (+)
AMCG00014465 NA coding upstream 169794 14719894 ~ 14750619 (+)
AMCG00014462 dmd,LOC106574978 coding upstream 228130 14684733 ~ 14692283 (+)
AMCG00014457 tmem47 coding upstream 458305 14452526 ~ 14462108 (+)
AMCG00014464 NA coding downstream 33932 15022999 ~ 15043455 (+)
AMCG00014469 dmd,LOC106574979,LOC107692624,LOC107665951 coding downstream 100628 15089695 ~ 15137536 (+)
AMCG00014468 NA coding downstream 175145 15164212 ~ 15179155 (+)
AMCG00014471 NA coding downstream 258704 15247771 ~ 15253971 (+)
AMCG00014472 wdfy2,LOC106582235 coding downstream 284494 15273561 ~ 15287276 (+)
G70271 NA non-coding upstream 452669 14466704 ~ 14467744 (+)
G70221 NA non-coding upstream 749401 14167446 ~ 14171012 (+)
G70054 NA non-coding upstream 1223542 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 1540009 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 1585228 13334214 ~ 13335185 (+)
G70286 NA non-coding downstream 190778 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 361575 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 461711 15450778 ~ 15451268 (+)
G70413 NA non-coding downstream 511491 15500558 ~ 15500832 (+)
G70415 NA non-coding downstream 516747 15505814 ~ 15506048 (+)
AMCG00014461 NA other upstream 563545 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 715399 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 1231225 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 1668681 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 4768500 10147979 ~ 10151913 (+)
AMCG00014470 NA other downstream 232847 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 686564 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 1140412 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 1476554 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 2375731 17364798 ~ 17487050 (+)

Expression


Co-expression Network