AMCG00014468


Basic Information

Item Value
gene id AMCG00014468
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15164212 ~ 15179155 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014468
GAAGATGAAAGAAGGGTCGGAGGACTGTAGCCATTGGCGGGCCCATTGACTCCCATTCCCAGTGAAGAGCCAGCAGTCCTGGGATGGCGCAGGGCAGCCAGCAGGTGGACTATCAGATCCTGCATGACCTGAAACAGCGCTTCCCCGAGATCCCCGAGGGAGTGGTGTCTCAGTGCATGCTGCAGaacaacaacaatctgGAGCTCTGTTGCCGAGTGCTGTCGCAGGAGAGCAGCAAGTACCTGTATGGGGAATACCACAGCCCAGAGGAGAGCAGGATGAGCCGGAACCACATGCTGCACATCAACCTTGGCATTCACTCTCCCACAGGGTACCACCACACCGGGGAAGGGGGCAAGGTTAATGGCGGGGTGCGGACGCTGGTGCACAGCTCAAGCGACGGGCACATCGACCCCCAGCGGAGCGGTGGAGGAGGCGTGGGGACGAAGCAGCACCAAATGCTGTCCCTGCTCCAGGAGCCGCACTCTGCTCCTGCCATTGTGGCCCCCTCTCCTGGCTACAACCCCTTCTTTGTGAACGACCAGGGCCGCTCAGCTGGCACGCCACCACCTGCTCCTTCAGCCATGCCGGGTATCTCACCCACCTACACCCCTGTTCCCCGGTATGCCATGAACCCCATCACGGTCACCTTGTCCCAGAACATCCCCTCTGCCCCCCGTGCATTGCAGATCCCTGGCTCCCTTTATGCCACTGCCGGCAATGCAGTTTACATCCACCCTGCCTCCTCCCAAAGCCCCCAGACCTCCCCCTGGCATTCCCCCACTGCTCAGTGCCACATGCAGCCCTACAACCAGCAGCCTCCTCATGCCCTGCCAGTCTACCAAGCCTCTCCCTACCAGTCCCCTTATTCCTCCAAGCAGGTCCCTCAGACAGCCTACcgctcccctcccccctcccaatTCCCCTCACCATACAGCTCCCCCCAGCACCAGATCCAGCAGACCTCCCATGTCTTCATGCCAATCAGCCCCCCAACAATGACATCCCACCCTTACCaccatcagcagcagcagcagcagcaacagcagcagcagcagcagagttACCAACAGCAGCCTGGCCAACCCGTCTCCTACATCCCCTACCTGTCCTCTAAGGGCTCTCTAAAGAATCAAATCGAGATCACTCTGGAAGCCCCCCAGCGGCCTCACAATCGCAGCTCCTCTCCCGTTATgagccagcagcagcagcagcgaggTCAGAACACTCTGTACATCTCCACCAACCCGTCTCCCAGTTCTCCCTCAAGGGGCATGTCTGGAGGCCAAATGAGCTTGACGGGCCAGCCCCAGGTGGCATCCTACCATCCTGGCATGTACATCCACCAGGGCCCCCCTCGCCCCCGGCCCACTTCCTCTCCCCAGCCTGGTGTAGGCGGTGGGGTCCGGGTCACCCAGCCCGGGAACTCCACTTACACCTTCAAGATCAAAGTGTCGCCTGGCAGACAGGTCCAGCCACGGCACCTAGAGTCGCCCACGGTGGAGACGGAGAGCCTTCTGAACCTGGTGGAGCAGGGAGAGCACCCCGGCGCCCCCCAGCCCATCCAGCCCATCTCTGCTCTGCCCGGCACCATCACAGACCGAGCTGCCAGCCGCTTCCCCAGGAAGTCCAGCTCTGGCTGTGATGACTACGCCTACACTCAAGCCCTGCTCCTGCACCAGCGAGCCCGCATGGAGAGGCTGGTGAAGGAGCTGCACCTAGAGCGGCAAAAGCTGGAGAAACTGAAGGCAGATGTCAACGATATGGAGTATGACGCCCTGCAGCGCCGCTTCCGCAGGGTTAACGCCTCTGCCCTCATCCCACAGCCAGAGGAAATGACAAGACTAAGAAGCCTAAATCGACAGCTTCAGATCGACATAGACTGTACCATGAAAGAAATAGACCTCCTTCAGTCCAGAGgGAAGTTTGATCCAAAAGCCATGAGCAACTTCTACGACAACATACAGCCTGGTCCTGTGGTACCTCCCAAGCCCACAAGAAAAGTAGACAGCCCCAGCACCAAGACCCCCTCTCGAGGGCCGCAGAGGGAGGAGGAGTTCGAGGGCGCTCAGTGGAACTGCGAGAGCTGCACCTTCCTCAACCACCCGGCGCTGAACCGCTGTGAGCAGTGTGAAATGCCCCGCTACACCTGAGTGTCAGCCTGCAAACATCAGCCCCAGCATGAGGACGACAGAGGGCACGGccgaaaggaaaaaaaaaaaccgatCCCACCATTACCCAGGAGTGCTGATAGGGCCGGGACGGCCTGCCTCCGTGTTCACCACTGAAGACTCGGCTCCTCCTGCAGGGCATCGAGGCCGCCGGGGCTCACGCTTTCACATGGCTGATGACACGGTAAAGCCAACGGCCCCCTCGGGCGGTTGGGCTCGTCATACTTCACGTTGGGCTGCTTTtccacctaccgctgtctcgttCACTATGGCCCGTGGCAGTTGGGTGATGGGAAGTTGAGGACAGGGCAGGGTGACCCGAAAACACACGTGTTGTAAACTTGCTGGAGTACATGTGGAAACAAAGTTTACTttcgattttatttttttaactttttttagtCTGACCGTGGCCCATGCCGATTAGTTCACTGGCAAAGCTGCTATGGAATTAAAGGGGGgttgggtgggggtgggggggctgatgACTAAGGTATCTCCATAAATGCTGCTTCTATGAAGGTAACCACAGTTGTCACAAAAATGCAGGGTGATCGTTATCGTTTCATAGGATTGTAGAGAGGAGAGGTGTATGCCTCATGCGTACAGGGTATACAAGCTTGAGGTGTCGCACCAATCCCGAGCGCTTCTCCCAGACCATGGCCTGCGTCCTTCACAGCGGCCACTCTGTTCACGCCTGAACGGTGCCGCACGCTCTCTCCTGCTAcggaaatgcttttaaaagccTCTCGCCTTTCCTCAGATAAAGggtggttttttttgtttttgtttttttaataaatgaggTTTCCTttccaaaaagaagaaaaccagTTTCTGTAACAGCACAGCAAACTCGCACCAAACTGATGAACTCAAACCCTGCTCAGGAAGAATAGTGCAGCCATGACGAAGACCATGCGTGCTAAAGAGGTTTGCTTCCTGTTACAGTTCTGTCCGAGCTTCCattctgtggagagagagagagagagagagagagaaaaagactgCAACTTTTATGGCACAGACATCCCTAGTGAGCGCCCAACAAACTTACCATTGCTGACACACATGGGTTCCATATTGGTTTATTTGCACATAAAAGATAAACCCGATCTCTAAATTAAGTATGAGATTGTACACTGCGTGTGAATTTTTTAAGAAGGAAACAAATAGTGTTCACCTGTTGAATGAAGAACACTAAAGGACTCgcaaataaatatgatatttcTGGTACTTTATGCATATTATGCTATACTGTATTCTAAAGGTGATGTTTTCTTGTGCGGATGCTTCAGGTTgctgtaatattaataaagcaCTCGTTCTGTGTCCAATAATTATGGGGTCTGAGCGACACAAAATGTGTGAATACTGTGCGTGTGAATGTCTGTGTACgaatgtgtatttgtgtcctCGTTAAGAAGATATGCCCTTCTCCTTACTGCCTTTGTAGAATTCAgactcattttaatttagatttttttcgtTTTACATTTTCACCTCAGATTTCTGTGTtcggtatgtttttttttgttttttttaattaatagtacatttaattttgtacagCCTTTTTTGCTGTATGATGCTGTTACTAAGCATAGAAATTACTTTTTGAGTTGGTTGTTGACTTAGACACTGTCCCTGTGCTCTCCACATGTGCGTGTATGTTTGGTACAGAAGAGACTTGGGAAGTGGTAGTCTTTTTAGTTTGCTCTGCTGTTGGTGAGCTCCTGGATTAAGTagtgtattgcatttttaaggATACCTTCATTGCAGATACTGACAATCTGAATTATTTACAGCTTATTCACTGTATCGGATGAATCTGCTCATCTGTCGATCCCTAGAGTAATGGAGTTTTCCCTTACTCATCTTACTATCTTAAACCTTATAAATAACTTGATTTACAGTAAACAAGTCCTATTTCCCTGTGGATATTTTGCACAAAgtcttaaaacaataaaataaaactgcagatttGCATTTTACTCATCCTAAACACTGCTGCAACTTCAGACTTGAAGTCCTTTGttagtagaaaacaaaaatagaccGGTTCTCCCGTCGTCTTGGGTGATTTTCTCCAAGCTCTTCATTGACCGTGTCTGTGTTGCTGATTCACTCGTGTCTCATAGCTGGTAATCACTGCGGTGTGCACTATCGATTATAAGCCTTGTTACCACTGGCACTGTGCAACAGCCTTTACTGTAAATCTCTCTGAAATGCTGCTAGGTAGTGCGTTATTATTTTTGGAGCTCCGAGTGCAGCGTTCTGACTTGTTTTTGGTTCTTCCTCAGGGACAGAAGGGATGTAAGATGTGCCCTTGACACATTTCTTCCCAACAAAATGACACTTCTATCCTATAGTTCACATCGTAGCATGGATCTGTGTTAGTGTGTATATAGTTGTTAGTTTTATTGGGGTTTAGCCATAACTCATTGGATATGTATTCCCTGTGTAGTTAGTCTTTAAACTTCAACTGTCAAAAACCGTGTCTCTCtctacagtctgaacagatttCTTACCAATGACAGATTGTATATGAACTACTGACATGTTAGAGATCActgttggatttttttattttgttttatttattttattatttttgtaaggattgatacaaaatattgattcaCGCTGAAGACCTTTGACTAGAAAGCAGCCACTTCCTGCAGAGCACAGTACCACTTGCTGTTCAGTGATTGCAAGTTTACCGCCAATCCGTGTGCAGCGCGCTTCCGCAAGTTTGAAAGAGGAACCCTGAAATCTAGTTTGGTTTCATTCAATTGAGATGCCTATTGATCTGTAAAACTGGTAATACGAATGCATATACACTTCATGCTGTCTGACTAGATAGTGTACAGTGATTGAGCCGATGGCTGTGTATTTGATCTGGAGCTCCATCCTCTTGGCTTTCCTGGCTGACCGGTGTTTGTGGTGTCCAGCAGCTAGATAGGTGTACCAAACCAGTTTCTTTTTGGAGAGCACTGTTGGGAGTAATATGAAATCTGATTTAAGCAAGGAGTTGTGCTGCCCAGCTGATTGTTGGTCTTTATTAGCAGGACTTGTCATATATTTCCAGAACCATGTTTCCTGAGGTGCTTTATGCCACACTGGCCTATGGAGTCTCTTCACTGTAAATGTCCActtgtcttttagttttttgcccCCTCTTTTACTTTTCTGGATCCTCTGTGCCACTCACCATAATGCACTGAATTGTACAAAGGCAGCAGGGCCAATGCATGTGTGCTACTGTCAATAGGCAGAACCCGCCGCGCAGGGTGGGTATAATCCTTTCCACTCAGAAGTGAAAGTGAGAGAACTGTACGACAGCAGAAAATGACTGAAGCTGTTCGTTGTGTAAACCAATGTAAAATGCAGCACTGGAAAAAATGTCTGACATGAACCTACACCTTGGCTCCCTTATTTGGCTGCATAGACGAAGCTTGAATTGACTCCATTCACCCATCAGGCATGCGACTGTCCTGGTCAGGTCTCTCCATGCAGGCTGGTAGAGTCCTGCTGTTGCTACCGTTCATACACCCACCTCTCCATGGAAAAGCTCAGGTTTGCAACCTGATTTAagattgtaaataatgtaatatattcaaaaaaataaaatgtataacaaatgcgtccatatgtttttattgtttatgaatgttaatgtacatttttattttttaaattggtc

Function

GO: NA

KEGG:

id description
K12793 MAP3K7IP3, TAB3; TAK1-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014468 True 5877 mRNA 0.49 6 15164212 15179155

Neighbor

gene id symbol gene type direction distance location
AMCG00014469 dmd,LOC106574979,LOC107692624,LOC107665951 coding upstream 26676 15089695 ~ 15137536 (+)
AMCG00014464 NA coding upstream 120757 15022999 ~ 15043455 (+)
AMCG00014467 NA coding upstream 175145 14920413 ~ 14989067 (+)
AMCG00014466 NA coding upstream 336091 14823792 ~ 14828121 (+)
AMCG00014463 NA coding upstream 353077 14767487 ~ 14811135 (+)
AMCG00014471 NA coding downstream 68616 15247771 ~ 15253971 (+)
AMCG00014472 wdfy2,LOC106582235 coding downstream 94406 15273561 ~ 15287276 (+)
AMCG00014476 NA coding downstream 153774 15332929 ~ 15336221 (+)
AMCG00014480 med4 coding downstream 186541 15365696 ~ 15371378 (+)
AMCG00014486 NA coding downstream 300297 15479452 ~ 15485053 (+)
G70271 NA non-coding upstream 696468 14466704 ~ 14467744 (+)
G70221 NA non-coding upstream 993200 14167446 ~ 14171012 (+)
G70054 NA non-coding upstream 1467341 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 1783808 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 1829027 13334214 ~ 13335185 (+)
G70286 NA non-coding downstream 690 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 171487 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 271623 15450778 ~ 15451268 (+)
G70413 NA non-coding downstream 321403 15500558 ~ 15500832 (+)
G70415 NA non-coding downstream 326659 15505814 ~ 15506048 (+)
AMCG00014461 NA other upstream 807344 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 959198 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 1475024 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 1912480 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 5012299 10147979 ~ 10151913 (+)
AMCG00014470 NA other downstream 42759 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 496476 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 950324 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 1286466 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 2185643 17364798 ~ 17487050 (+)

Expression


Co-expression Network