Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014472 |
| gene name | wdfy2,LOC106582235 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 15273561 ~ 15287276 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| wdfy2 | Predicted to enable metal ion binding activity. Predicted to be located in early endosome. Orthologous to human WDFY2 (WD repeat and FYVE domain containing 2). |
| description |
|---|
| PREDICTED: WD repeat and FYVE domain-containing protein 2 |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| K23532 | WDFY2; WD repeat and FYVE domain-containing protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014472 | True | 1203 | mRNA | 0.54 | 12 | 15273561 | 15287276 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014471 | NA | coding | upstream | 19590 | 15247771 ~ 15253971 (+) |
| AMCG00014468 | NA | coding | upstream | 94406 | 15164212 ~ 15179155 (+) |
| AMCG00014469 | dmd,LOC106574979,LOC107692624,LOC107665951 | coding | upstream | 136025 | 15089695 ~ 15137536 (+) |
| AMCG00014464 | NA | coding | upstream | 230106 | 15022999 ~ 15043455 (+) |
| AMCG00014467 | NA | coding | upstream | 284494 | 14920413 ~ 14989067 (+) |
| AMCG00014476 | NA | coding | downstream | 45653 | 15332929 ~ 15336221 (+) |
| AMCG00014480 | med4 | coding | downstream | 78420 | 15365696 ~ 15371378 (+) |
| AMCG00014486 | NA | coding | downstream | 192176 | 15479452 ~ 15485053 (+) |
| AMCG00014481 | NA | coding | downstream | 207949 | 15495225 ~ 15499833 (+) |
| AMCG00014482 | NA | coding | downstream | 230595 | 15517871 ~ 15522481 (+) |
| G70286 | NA | non-coding | upstream | 92741 | 15179845 ~ 15180820 (+) |
| G70271 | NA | non-coding | upstream | 805817 | 14466704 ~ 14467744 (+) |
| G70221 | NA | non-coding | upstream | 1102549 | 14167446 ~ 14171012 (+) |
| G70054 | NA | non-coding | upstream | 1576690 | 13694815 ~ 13696871 (+) |
| G69961 | NA | non-coding | upstream | 1893157 | 13352333 ~ 13380404 (+) |
| G70378 | itm2b,LOC108430053 | non-coding | downstream | 63366 | 15350642 ~ 15430852 (+) |
| G70409 | NA | non-coding | downstream | 163502 | 15450778 ~ 15451268 (+) |
| G70413 | NA | non-coding | downstream | 213282 | 15500558 ~ 15500832 (+) |
| G70415 | NA | non-coding | downstream | 218538 | 15505814 ~ 15506048 (+) |
| G70418 | NA | non-coding | downstream | 235249 | 15522525 ~ 15525015 (+) |
| AMCG00014470 | NA | other | upstream | 31228 | 15221914 ~ 15242333 (+) |
| AMCG00014461 | NA | other | upstream | 916693 | 14302447 ~ 14356868 (+) |
| AMCG00014456 | NA | other | upstream | 1068547 | 14189564 ~ 14205014 (+) |
| AMCG00014423 | pou2f1b,LOC107748141 | other | upstream | 1584373 | 13655238 ~ 13689188 (+) |
| AMCG00014407 | LOC107725344 | other | upstream | 2021829 | 13246309 ~ 13251732 (+) |
| AMCG00014490 | rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 | other | downstream | 388355 | 15675631 ~ 15685899 (+) |
| AMCG00014508 | NA | other | downstream | 842203 | 16129479 ~ 16139032 (+) |
| AMCG00014525 | NA | other | downstream | 1178345 | 16465621 ~ 16469209 (+) |
| AMCG00014553 | atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 | other | downstream | 2077522 | 17364798 ~ 17487050 (+) |
| G71004 | NA | other | downstream | 2984578 | 18271854 ~ 18274360 (+) |
