AMCG00014482


Basic Information

Item Value
gene id AMCG00014482
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15517871 ~ 15522481 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014482
GcgcatttcacacacaaataacacacGGTcgtaaaaatgtattgtattgtttcttaCTCTTAAAGCATGTGACGCTTCACCTGCACATAGTCTGTATGCGTCTGCAGAGACATGAGTAACTGCAGCCCACACCGCAGACTGCGGCGCTGGCTAATCGTTTCTAGAAATATCACTCGTTTGCAGCGCTTTTATTTCAAAGCAACCAAGGCAATGGCGTTGACCCAGATTTCATCTAACAAATGTTGGGGTGGTTTCCAGAAAGTGTTCGAGCACGACAGTGCAGAGCTCAGATGCAGAATGAGGTTTGGGATCTATCTGCCCCCTAAAGCAGAAAGTGGAAAGTGTCCCGTGATGTACTGGCTGTCTGGGCTGACATGCACAGAGCAGAACTTCATTACTAAAGGAGGCAGCCAGCAGGCAGCTGCTGACCATGGGATTGTCATTGTGGCCCCGGATACAAGTCCCCGTGGCTGTAATATTGAAGGGGAGGATGAGAGCTGGGACTTCGGCACTGGAGCGGGTTTTTACATCAATGCTACAGAAGAGCCCTGGAAAACCAACTACTGCATGTATTCCTACATCACGGAGGAGctccctCGTCTGATCAATGCCAACTTCCCTGTGGACTCTGAGAGGATGTCTATTTCTGGCCACTCCATGGGCGGCCATGGGGCTCTGATCTGCACCTTGAAGAATCCTGGGAAATACAAGGCAGGCTGTTTCTGCATTCGCTCCAATCTGCAACCCCATGCAGTGTGCTTGGGGACAGAAGGCCTTCAGTGGAGCTATGATGCCACAGTCCTGGCGAGCAGATATTCCGGGCCTCAGCTGGACATCCTGATCGATCAAGGCAAGGAAGACCAGTTCCTGGCAGCTGGGCAGCTCCTCCCGGACAACCTGATAGCAGCCTGCACTGAGAAGAAGCTCCCAGTGGTGTTCAGACTGCAGCAGGGTTATGACCACAGTTACTACTTTGTTTTGTCCTTCATCAATGATCACATCAAACACCACGCCAAGTACCTGAATGCTTAACACCTGGACCCACCTTCATCAGTGCCTTTCGATGCCACACTGCTCCCTGGAGCCAAAGGCTGTTTTGTGCAACATTTCTGTTATAGTGAATTCTGCATTTATGAAATATAGGCAACGTATGGTTTGCTCATTTGCATCCCTAAATAAAGATCTGTGAGTGGTTTACAATGTCTGAGATCATTTGATACCATAACCTCTTAAGTTAATTAAACACTAACTGGTGGGTAGAATTCACAGGAGAGTAGAATAATAAAATTACTATTATGGTGTTTGGAAAGGATTTCCAAGGACCAGGGCTACCAACCAAAAGGGGTTTTCTTGTTTAAGCAGAGCTCCTTAAATGtgtaactttttaaaatatttaac

Function

GO:

id name namespace
GO:0046294 formaldehyde catabolic process biological_process
GO:0018738 S-formylglutathione hydrolase activity molecular_function

KEGG:

id description
K01070 frmB, ESD, fghA; S-formylglutathione hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014482 True 1398 mRNA 0.47 9 15517871 15522481

Neighbor

gene id symbol gene type direction distance location
AMCG00014481 NA coding upstream 18038 15495225 ~ 15499833 (+)
AMCG00014486 NA coding upstream 32818 15479452 ~ 15485053 (+)
AMCG00014480 med4 coding upstream 146493 15365696 ~ 15371378 (+)
AMCG00014476 NA coding upstream 181650 15332929 ~ 15336221 (+)
AMCG00014472 wdfy2,LOC106582235 coding upstream 230595 15273561 ~ 15287276 (+)
AMCG00014488 NA coding downstream 77678 15600159 ~ 15617165 (+)
AMCG00014489 lcp1,LOC106582249 coding downstream 107709 15630190 ~ 15654845 (+)
AMCG00014487 zc3h13,LOC105022574,LOC106573267,LOC106510916 coding downstream 134448 15656929 ~ 15671148 (+)
AMCG00014496 pdcl3,LOC106586481,LOC102788355 coding downstream 177673 15700154 ~ 15703459 (+)
AMCG00014494 NA coding downstream 193319 15715800 ~ 15725440 (+)
G70415 NA non-coding upstream 11823 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 17039 15500558 ~ 15500832 (+)
G70409 NA non-coding upstream 66603 15450778 ~ 15451268 (+)
G70378 itm2b,LOC108430053 non-coding upstream 87019 15350642 ~ 15430852 (+)
G70286 NA non-coding upstream 337051 15179845 ~ 15180820 (+)
G70418 NA non-coding downstream 44 15522525 ~ 15525015 (+)
G70496 NA non-coding downstream 204953 15727434 ~ 15728917 (+)
G70562 NA non-coding downstream 395932 15918413 ~ 15918621 (+)
G70637 NA non-coding downstream 714629 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 967930 16490411 ~ 16491118 (+)
AMCG00014470 NA other upstream 275538 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1161003 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1312857 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 1828683 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 2266139 13246309 ~ 13251732 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 153150 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 606998 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 943140 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1842317 17364798 ~ 17487050 (+)
G71004 NA other downstream 2749373 18271854 ~ 18274360 (+)

Expression


Co-expression Network