AMCG00014488


Basic Information

Item Value
gene id AMCG00014488
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15600159 ~ 15617165 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014488
atgtttggtgtttttttcagttctgcAGCCTGGTACACACCCACAGACAAGCATGTCTTCCCAGGCATACTTACAGTGGCCTTATTACATTCACCAGGAGATGGGTTTAATATCCACAACATATCCATGGGAACCCATGTGAGAACTGTCAAAGTGACTAACCCTTCAGAGTTCCTAGAGTTCATTCAACAGACTGAAAGAGACAAGTCTGCCAAATTCCCAGGGACACTTTCTGAAAATACGGCAGGTCATACTAAGCACACGGCCAGACCAGATGCTGGAAATGGATGCGATGTTGGGAGTGGGCCGAAGAGGCCTGTGGAGCCCTCTCACTACTCATTGGATGCTCCAGGGCTTAAAGTTGCCCTGGACACTGTGAACAAAAAGGCAACAGAAGTTATTGACCTCACAGAGCTGGCTTCCAGATCAGCAGCCTTCCCCACACCAGATTATTTCACCCTCCCTGAAGACTTCCAGATGAATTCTTCAATATCCACTGCATTTCAGACCTCACAGATGGAATGGGGGAGGCCTGTGGAGCCCTCTCACTCCTCTCGGGATGCTCCAGGGCTTAAAGCTGCCCCAGGGCTTAAAGCTGCCCCGGACACTGTGAAGGAAAAGGCAGCAGAGGAAGTTTTCTACCTCACAGGGTTTGGAGAAACTCACAGCTCACCAACAGAGGCTGCTGAGGAGCCCAGTGCTCCTGCAGAGTGCGACCGTGGCAGTGCTGTGCTCTCGCGGCCTGACTGCGTGACGGGACCTCCTGACACTGTCTATAAGAAGCCCTTTCCTCCAACTCAGATGCCACTCACCTCTATGCTAGCAGGGGAATTCTCCAAACCAGCTGTAATTGGACACTATAGGAGACTATCAGCCACCCCAGAAACTGTGAAGGAAATCCTCATATCGGTCCTTGAGAGCTCGGGGGGGCTGAAGTACAAGCCACTTCCACAGATGTCCCCACCCCGCACCATGCACAGCAGGACCAGCTGTGCACGGGACTGGACTCGCAGCAGCGATGATGACCTCTCTGAAGGCAGTTGGAGTGAAAGTGATGATGGCTACAGTGAGAAAGAGAATGCAGCACTTAAGAAAGAAACCACAACACAGCAGACTTCTTCCCAGTTGGATCCAGATGAAGACTGCTATTATCTCCCAAGGAGCAGCCCAGTCATTTCTCGCAAAAAAAGGTTTGCAGGGCCTAGGCCCATCTCATCACCTGGAGAAAGGTCTGTCTCTCCATCAAAACAGCTGTCAGCTTCTCCACACAGATCCCCCTCTCCGGCATCAGTGGACTCATTTCTGAAGGACAGAAAGACTTGCAACCCCCCCCTTCAGGAAGCCTCTTGCGAGCCTGATAAACCCAGGAGCACCTCACTCTCGGCCAACCTCAACAGGCTTTTCCCCATCGGGATCcagttcccctttaagactTCAGCATTCGTAGAAGGAGCGAGGCGTTCCCCTGAGGAGGGCTCCAAGCCTCGCTCTCACACCGACTCCTTCATCCACCTTGCATCTTGGAAGGATGCTGCTGATGTGAGCAAAGAACCTCTCAATTTTGCCAGCTCCCCTGATGACATTCTAAAGGCAAGCAGTGATCTTGACAAGGAGAACGCCCACTTCATCATTGTGGACATGGTGCTGTCTGCGCTGGAGAGCGTGAAGTGGGCAGTGCAGAGTCACAGGGCTGGGGAGGCTGCAGGAGGGCAGCCAGGCTCTCTCTCGGGGCTGCAGGATGAGGAGCACAACAGCAGCGGTTCCCTCTCCAAGAAGCACTCGGAGTCTGTGGCTTCCTCGGACAGTGGCTATGAAGGGTATCCTGCAACACAGTCCGAAGCCTTTctttactctcctgtctctgtcccccACGTTCAAAAGGAGCCAGAGGATAATGCACCGTACCCAAATTTAAGTAAGTTCGAGAGAAACACACTCGCCCCAGACCTTGGCACAAGTTCTTCCTTGAGGAGTCCCTCCATAGCCCCCACAAGCCCCTTCACAGCAGAAGTGCTAGCTCAGCAGCTGGTGACCGTGTTCCGGAAGCAATGGTTACACTTGGAGAGGCAGCCGCGCAGCTCCTCCAGCCCGGGCCCAGCACTGCAGGAATTTTTCCAGAGCGAAGCAGGCATGCCAGCGGAGTGCAGCGTCTCTCTGGCAGAGGAGATTAAACTGAGGTCCCGAATGCGTGGCACCTTGATCTGGGCTCCTCCTCGCTTTCAGATCATCTTTAACATTCACCCTCCACAGAAGCGCAGTGTTGTTGTAGCATCTCAGCACTACCTCTGCGCCGGCTGTGGCACCGAAGTGGAACCGAAGTATATTAAGAAACTGCGCTACTGTGAATACCTGGGGAAGTACTTCTGTGACTGCTGCCACAGTGACTCGGAGTCTTCCATCCCCGGGCACATAGTGATGAAGTGGGACTTCAGCAAATACCCAGTCTGTAACTTTTCCAAACAGCTCCTGGACAGCATATGGCACAACCCACTCTTCAATGTGTCTTGTATTAATAAAGCACTGTACAGCAAAGCAAAGGAGCTGGACAGGTTCAGGGAACTTCAAGAACAATTGTTAAGCATTAAGAAACTGCTGGCAACTTGCAGATTATCAAAAagTGTCCTGCAGGAGATTGAGCAGCTTCCAGAGCACCTGACTCACGAACAGCATCTCTTCTCTTTGGAAGACCTGGTGAATATCAAGCGTGGCCTGCTACAGACCCAGGCCAGAGCGCTGCTGAAACTGGCGTCTGCTCATGTGGAGATCTGTGAGCTGTGCCTCGCCAAGGGGTTTATCTGTGAATTTTGCAAGAGCAAAGAAGTGCTCTTTCCCTTCCAGAGAGAAACTTGTAAACGCTGTGAAGaatgCAAAGCATGCTTCCACAAGTACTGTTTCAAAGAGGAAGACTGTCCTAAATGTATACGGATACAGACTCGGAGGAAACTGAAGGACTCTTTCTCTCTGGACGTTAAATAACCCACAATCCAACATGAAAGTCTTCAGGGATGTATGAAAGCTATCCAATTAGTAATGATGAGGAGCATCTTGTTTGTGTAGTAATGCTCCTCATTTTAAACGCATTATGACATCCAACcaggatttaaaaatatctagTTTTGCCTTTGTATTTTCTGGTTGAATTGCAATTaatttacaatgaaaatgtattccgAATACTGAGTATTCTGAAAGAATGTGGAATGCATTGTGCATCTAATTCTCTAGCAGTGTTATTGCtgctttatgttgttttaaactgtgtaaaatcTTATTAAAGGAAc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014488 True 3281 mRNA 0.50 17 15600159 15617165

Neighbor

gene id symbol gene type direction distance location
AMCG00014482 NA coding upstream 77678 15517871 ~ 15522481 (+)
AMCG00014481 NA coding upstream 100326 15495225 ~ 15499833 (+)
AMCG00014486 NA coding upstream 115106 15479452 ~ 15485053 (+)
AMCG00014480 med4 coding upstream 228781 15365696 ~ 15371378 (+)
AMCG00014476 NA coding upstream 263938 15332929 ~ 15336221 (+)
AMCG00014489 lcp1,LOC106582249 coding downstream 13025 15630190 ~ 15654845 (+)
AMCG00014487 zc3h13,LOC105022574,LOC106573267,LOC106510916 coding downstream 39764 15656929 ~ 15671148 (+)
AMCG00014496 pdcl3,LOC106586481,LOC102788355 coding downstream 82989 15700154 ~ 15703459 (+)
AMCG00014494 NA coding downstream 98635 15715800 ~ 15725440 (+)
AMCG00014495 NA coding downstream 118480 15735645 ~ 15749118 (+)
G70418 NA non-coding upstream 75144 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 94111 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 99327 15500558 ~ 15500832 (+)
G70409 NA non-coding upstream 148891 15450778 ~ 15451268 (+)
G70378 itm2b,LOC108430053 non-coding upstream 169307 15350642 ~ 15430852 (+)
G70496 NA non-coding downstream 110269 15727434 ~ 15728917 (+)
G70562 NA non-coding downstream 301248 15918413 ~ 15918621 (+)
G70637 NA non-coding downstream 619945 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 873246 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 1113713 16730878 ~ 16733637 (+)
AMCG00014470 NA other upstream 357826 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1243291 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1395145 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 1910971 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 2348427 13246309 ~ 13251732 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 58466 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 512314 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 848456 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1747633 17364798 ~ 17487050 (+)
G71004 NA other downstream 2654689 18271854 ~ 18274360 (+)

Expression


Co-expression Network