AMCG00014492


Basic Information

Item Value
gene id AMCG00014492
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15526728 ~ 15564001 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014492
ATGGCCACTCCAGCATCTGTTCTTGGAGCCCCCAGTCGAAATCAGCTCTCTGGCCTGCCAACCTGCCTGTGTGGTCTTCCACTCAGAGTTCTCATAGCAAGTAACAATAAGCTGGGGTCCCTGCCTGAAGAAATTGGCAAGCTAAAGAACCTAATGGAATTGGATGTCAGCTGCAATGAGATCACAACCCTGCCGCAGAACATCGGGAAGCTGAAGGCCCTGCGAGAGCTCAACATCAGGAGGAATTACCTCAGTGCATTACCAGAGGATCTTGCGGACCTTCCCTTGGTGAAGTTGGACTTTTCCTGCAACAAAGTGTCTGTGATCCCAATCTGCTATAGGAAGATGACACAGCTTCAGACATTACAACTGGAGAACAATCCTTTACAGAGCCCACCTGCACAGATCTGTTTAAAAGGGAAGGTGCATATTTTCAAGTACCTGAACATTGAGTCATGCCGGATGGAGAAGACAGGGGACCAACTGTTCCTGCCAGCAATGGAGCGGCTCAGTTTGTCCCAGCCTGCAGCAGGCAGCATTGAAGATATCGACCAGAATAAGAAACAGGACACGGATTCGGGAGTCGGCAGTGACAATGGAGATAAGCGACTGTCTGCAACGGAGCCGTCGGATGAAGACAGCCTGAGTCTGAACGCACCGATGTCACACATAACAGAGGAGGAAGGACTGGGTAAAGATGACTCCAGCGAGCACATCAACACACTGAAAGTTGATTGTGACCAGCACTTGGCAAAGGTGGCTGAAAACAATAACACTGAGGAGCTTCAGGACAAATTAGTGTACAGGGAGCCTGGGCTGAGCACTCAATTTGTCAGCTATATCAAGGCAAGTCTCCCACACCTTATGAGCTGCTGCAAGCTCACTTCATGCAGAGCCACAGATTTTGATGAACCCCTCCGAATAGAAGAAGACACAAGCTGGAGCGCAGAACAAACAGTACACATGAACACCCCAGACACTCCAGGAGTCCAGCTCTACCCCGTGGATATGGTCAGTTCAGACGAGTCCTCTCTCAACGGTCAGGTCTGTGAGGATGATCTGGACACACCAAAGAGTGAAAGTACTGATGGAGAGCTTGAGTTCCAGAAGAAGAGGGGGTTGATTCTAGAGAAAGCCAGGCATGAGGCCCAGCTTGCATGCCAGCAGTTTGAAAGACAAATGTCAAACCAGAGAGACTCGAGTCTGCAGGGAGCACAGAGTGAGCTGTGGGGAGACTCTGTGGATAGGGGGGAAGACAAAAGTCCTGCTTTATCTCCTTCATTAAACTCTCCTCCTTTTGGGTTAAAGCCCCGATCAGTCCAGTCCCTGCTGCCCTCCTTTCCCCTTCCCTCTTTCAGCACTGTCACACAGGGCCTGACAGGGGATAGAGACACCTTCACTCCCCCAGCTGAAGGAGGCATGCAAAGCAGTGTTTTCTTGAGGACCCCCAAGAGCATGGAGTCGGTCGACCCGCAGTTTACCATCCGCCGCAAGATGGAGCAAATGAgagaggagctggagctgaTGGATCAGCTCAGGGAGaTCATTGAGAGCAGGCTGAAGGTGGTGTTATCAGATGACCTGGGAGCATCTCTGATGGACGGCGTGGTCCTGTGCCATTTAGTCAACCACCTGCGCCCGCGATCCGTCGGCAGCATTCACATCCCATCACCAGCAGTGCCTAAACTCAGTATGGCCAAGTGCCGGAGGAATGTGGAGAACTTCCTGGATGCCTGCAGGAAGCTGGGAGTGCCGGAGgaGAAGTTATGTCTGCCCCATCACATACTTGAAGAGAAAGGCTTGGTTAAAATCAGCATAACCGTCCAAGCACTGGTGGACGAGGCCACAACCAAACAAGCCTTGTTTACGTGAGAACCAAGTAAGACGGAGGGAAAATCAGGCCGAACACTGCCTGAAAGCACAGCACAAAAGACAAGggttttaatacatgttttgtaacCAAAGTGAAACAGCACATATTGCCACTATACCTCCTGAAAGAgaattgtcttattttttttaaaggactttattttccatttttatagGAACCTTAATACATTCAGAactcattttcattattgttaacAAGCAGGTTTTGCCAGACATTTTATGCAGGTTTTTGGCATTTATTCATAAATGCAGGACAGTTATTTCAAGTGAGCAGTGGCTTTCTAAAGCAGGTGGTCCAGCTTGGATCAAAAAGCACCTTGTCACTGATGTGGAGATGTTGGACACCTAAAGGTTTTATATACAGTGGACAGCAGTGCAGGCCTTTCAAACAGATGATTAGGTGATAGTTGCACCAAAAGCTAGGAGCATTTTTCTAGAGAGAGAGTTGCTCTGGTGCTGGAAATCTATTCTGAAATAAATCCGAGTTCTACTTTCGCAGCCGGACACATGGCCTCGTATTACAActttcttatttatattatttattacaattctTTTGTCGTCAAGGAGGATGAAGGATGTAAACGTCACAAGAAGTGTATCCCAAAAATGCTTTTTAACacagttaatatattttgatagATGTAGTCTTGAAAAATTatgttctgtattattattatttttttatcttttttttattattcagttgAGTTGCTCTCCGGTGTGTCTCAGGGGTTGGTGACTTACTACATTATTGCATTTCATTCCATGGCTGCTTTGTGTGCGTTTGTTCACGTGTGTGTGGTTTATACATTCCATCTACCTTACTGACCCACTTACACTTAAGATCTATGTTGTCGAAAACATGAAGGAAGGCATAGAATGTGGTTTAAGCAAGCTCTTGTTATTAGAACTGAATGAGCTGCATACACCTgacatggatggatggatcagAAAGGTTCCCACCCCCATCCTTTTACCCATAGTGGGAAGCCCAAGGGTGTGACACAATATCACAACTTCCCACGCCAATCCCACCtgtatgagtccagagcccagcACACTGTACCCACCTCAGTACAGaatggagcagcagcagcagcagcagcacacttTCCCAACACTTAGGTTGCATTCAATAAAAGGCTGAGGTAGGAGGTCCACTTGTTGAGTGAACAGAACCTATTTGTATAcaaggaaacattttattttgatcccATTTATGTGCTGCATCACaagcatgttttacattttgatgtccacttacagaaaatacagtgcatccggaaagtattgacaccgcttcactttttccacattttgttatgttacagcattactccaaaattgattaaattaattattttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014492 True 3262 mRNA 0.46 19 15526728 15564001

Neighbor

gene id symbol gene type direction distance location
AMCG00014485 nudt15 coding downstream 155603 15370180 ~ 15371125 (-)
AMCG00014484 NA coding downstream 163798 15350804 ~ 15362930 (-)
AMCG00014483 NA coding downstream 178255 15336207 ~ 15348473 (-)
AMCG00014477 NA coding downstream 196816 15310175 ~ 15329912 (-)
AMCG00014478 NA coding downstream 222823 15302342 ~ 15303905 (-)
AMCG00014493 NA coding upstream 26988 15590989 ~ 15595573 (-)
AMCG00014491 NA coding upstream 55161 15619162 ~ 15627108 (-)
AMCG00014499 cnot11,LOC106582250 coding upstream 109025 15673026 ~ 15676127 (-)
AMCG00014498 NA coding upstream 115794 15679795 ~ 15697711 (-)
AMCG00014497 NA coding upstream 185333 15749334 ~ 15751165 (-)
G70420 NA non-coding downstream 1714 15522520 ~ 15525014 (-)
G70425 NA non-coding downstream 20217 15506304 ~ 15506511 (-)
G70407 NA non-coding downstream 140028 15383633 ~ 15386700 (-)
G70402 sucla2,LOC107705569,LOC107584790 non-coding downstream 149954 15374238 ~ 15376774 (-)
G70346 NA non-coding downstream 284395 15238803 ~ 15242333 (-)
G70458 NA non-coding upstream 79618 15643619 ~ 15644914 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding upstream 136207 15700208 ~ 15703314 (-)
G70660 NA non-coding upstream 648543 16212544 ~ 16214127 (-)
G70679 NA non-coding upstream 717684 16281685 ~ 16281899 (-)
G70689 NA non-coding upstream 802123 16366124 ~ 16369464 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 2392977 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 3859191 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 4389642 11125029 ~ 11137086 (-)
G69537 NA other downstream 4728581 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 5465498 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 1158072 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 1882867 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 2025266 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 2426650 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 3637802 19201803 ~ 19203567 (-)

Expression


Co-expression Network