AMCG00014495


Basic Information

Item Value
gene id AMCG00014495
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15735645 ~ 15749118 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014495
TTGCTGCGCTGTTACACAGTCCGGGTCTGGGTGCTTTCAGAGGATGTCCTACAATACAACGACATGCAATATgaagacaaaacacacagatttaCAACTACACAAGTGCGTGTAAACCAACTTGTGTGACGGGATCTGGGCCAGCTCAGAGGAAACGGCCGACACCGGGACCAGGCTTCAACAGGGCTCGGCGGCGGGGACGTGTTGGACTGGGCTACGTGATCAGATGCAGATTGAGTAACTTGTTATACAAAAGGTGGTGAACTGGAACTGACGTCGgctcatttttatgtttgtttcaaaGTGACATTTTTAGACGGAGGAATTGGGCTCGGGGTCGTCTGGGAAGTGAACATCACTCCAGCtcattgtttttcactttttggtTCAGACCTGTGAGGTAACAATGCGAATGAATAAGGTCATTTTTTGTAAcgacatttaaaacatgtattattcatactactaataatatttttaaagaattacaTCCTCGACTTATCGCTAGTACACCGGCCTGGCTGCGGGGGACGTGCTCCGGCAGGGCTGCGGGCGGGCGACGCGCTGAGACCTGCGACATAGGGACACTTGCGCCCGGCGCTCCGGCTGCTGCTTCTCCTCACGGCAGTCCCTCGGCTTTATTCCCTTCATTGTCCATTGAACATGGCTACGAAAAGTCAGTCCATACAAGTACATAATATAGACGATTTACGAACTGTCGCCGAAGGACTTTCCTAGTTATACAAGTAGTATATGTAACCCCATTCTCTCTGGGATGAGGCCTACTTCAAACTGCTGGCATCGTCCCATTCCGGTTTTTGGAGAAGGGACATTCCAGTAGTTCACAGGACTCCTACAACCGTCGTCAGTTGTATAACTTTTTGTACTACCGTATTTCGGCCACTGTAGTGTTTTCCGgttatacatacatgtatatattctttaaacCAGTATATTTGACCAACACCATGGAGACTGGAAACCGACACCACTCGGAACAATTCATCCACGACCTCTCCCACCCCGGCGCTCTGGGCTTGTGCCCCGAGATGCTGGAAGTCGCGGAACAGGCCTGTCGGGCCGGAGATTATGATTTAGCGGCCGAAATATATGCCTCCCAACTGGCCGATCTCCAGCACCCCGACCGGGGACTGTGCCTCCGGAAAGGAGACGCTTTGGCTCGGGCAGGACGGATTGCGGAGGCGCTGGACTCCTACTGCACGGCGGCTAATCTCGGCAGGCTTCGCCCGgaggagctggggctgctggtgGAAAACATTGCTAAGACGCTTCGGGAGAAAGAACTGTCTAGTTTGCTGCGAAAGACTAACCCTAAAGAGGACCTCGTCAAAAGAGGGGGAAATAGGGACTTTGTTTACACGTCTAGCGGGCAAGGGGACCCGGAGCGCTTTACAGACCCCATCGGGGACGAGGAGGCGCTGGACATGTTCTCCTGCCCGCTGTGCAAATGCTTGCTGTCCGACCCCACCACGCTACAATGCGGACATACCTACTGCAAACGGTGCCTGGAGGACGACGCAGTCACTGAATGCATGGGCTGTAAATATAAAGTGAATAAAAAGGACGGACAGCTGTGCGCCATCGGCTTTAGAGTGAATGTCATCCTTTGCCATTTATTAGAGAAGTGGTTCGACTCGGAGAGTAAAGCTAGGAAGTTGTGGCTGGAAGGCGAAAGTCTGTGGAAAAAGCAAGACATTCAGGCTGCCTTGGAGAAGTACAACGAAGCGGTAGAGCTAGCAGCATTTGGCCCTAAAACCAACCACCTCAGCcagcatacatttttcatgttgaGCAGAGCGCACTACTTGAGAGCATCTGCACTAACTAAGGCTGGCAGGATGGAGGAGGCTTTACAAGAGTATTTCTTCTGTATTGCATTGAGGCCCGACTGGAGTTTAGTAAAACTGGAAGCCCAGAAGATCCTGAGCGAGATGTTCTCTTCAGTATTCGAGAATGACAGTCTGCCAGCTCCCCTGCGGCCTCAGCCACTGTCCACTCACCTGAAGCCCTCACTGCTCAGCTCCATTCACTCACCGCTGACACACGACAGTCAGAGAGCAGGTTCCTCCAAGGACTCGGTATTAAATATAACCAAGAGCGGGCCTTGTGACAGCAATGTTTTCAGCGGTGTTAAACCTATGAAGTCGCCTAAGTCGCTGACTGAACATGAATTCTCCTTTGGGGATAGAAAGACCCTGAACCTTGTCCTCTCCAGTCTTCCTGGCCCGAGCCTCAAGAGGAAATGCCTTAGTGACCCTTCCAGTGTTGGCCCCCCCAGCAAACTTTTAAAAGAAGGTGGGGACTGCTTACCTCAGAAACCCGCTGCTTGTAATGGATGGAGGGAAGTTTCTGCTTCGCTTGTTGACAGCTCAGACATGGAATGCTCTCTCTGCATGAGGCTATTTTATGAGCCAGTCGCAACTCCCTGCGGACACACCTTTTGCCTGAAGTGTCTGGAGCGTTGCCTTGACCATAACCACAACTGCCCTCTGTGCAAAGAGAACCTATCAGAGTATATGGCTACCAGAGTGTACAACAAAACCTTGCTATTGGAAGAGGTGCTCCTCCGCTACCTGTCTGAGGAACTGTTGGAGAGGAAGAAAGTTCACGAGGAGGAGCTGAAGGAGCTATCAAACTTGAATAAGGAAGTGCCCATCTTTGTGTGCACCATGGCATTTCCCACCATCCCCTGCCCCCTGCACGTCTTTGAGCCAAGGTACCGGCTCATGATCCGCAGATCCATGGAGACTGGAACCAAGCAGTTTGGGATGTGCATTGCAGACGAGCTTAAAGGgTTTGCAGACTATGGCTGTATGTTAGAGGTCAGAGACGTTAAATTCTTCCCAGACGGCCGCTCAGTAGTGGACACCATCGGCGTGTCCAGGTTTAAAGTTCTAAGCCACGGCCAGAGGGACGGTTACAACACTGCGAAAATAGAATACCTGGAAGACAAAAAGGTGGAGGGAGAGGAATACACTGAGCTGGTGCGGCTGCATGACTCCGTGTACGATCAGGCTGTGGCCTGGTTCACCTCCCTCAAAGAGAACATGAAGAACCAGATTCTAAGCCACTTTGGATCCATGCCTGGAAAACAGTCTGATCCTCAGGCCAGTCCCAGTGGACCTGCGTGGTGCTGGTGGCTCCTGGCGGTTCTGCCCTTGGAGAACAGAGCTCAGCTGACCATACTGGCCATGACATCTCTCAAGGAGCGCCTGATTGCTATAAGACGTGTGCTGATCTTCGTGACCCGCAAAAGAGCTCGATGACCACAGTGCACCTCAGGGATACTCATTTCGAACTGTGGAAGGGCCACCCATTGGAGAAAACTAGAAGGGTTCACAAgcgtttgtttttatttatccacCAGCAAAAGATGCACTCCCAACTCCTTGTACTCTCTACTAATTGAGTATCTGTCTTGCTTCCCAAGGTGGTAATAAGCCATCGCTGGGAACGCAACTCCAAATTATATATTCCAGTGGAGTAACGGCAAATCATAATTTGAGTGAAAAACTGTCACAGAGATGCGGTGGTCCTCCCTGCTGAACTGGAAATGTGggggatttttgttttggaatgCACAATTACCCTTTTTTAAAATCCCCTGAGCGTGGGGTGCATCTTGTGGAAGGCTTAATCTATTCTTATTCTGTAGctttatttgcaaaaaaattCATATTTCAGTCTGTGCCTGATCACCCTGACAAATCTGAGCCATTGTCCTGTTAAATATTGACATTCAAAACAAGCTATCACTTAATTGTCAAAATGTTCTTCCAACTATTTTGACTTACTGAAGCTCTAATATGCCTCAGATGTCTTAACTTGGCACGCATAAGGTTAAGAGTGATCCATTTGTCTACattgtaaatttgtaaaaatgccaaaaatgtataattccaAGAACTAGAATGTAGGTGtccttagttttgttttttctggttgTTTTCCCAATACATTCAGATCTATACCCACATATACTTAAAATATCATCTGTTCTGTGAAGTATGTTATACACTGAGGTTTATCCCAGAGTAGGCACTTCAGATAATACTTGATCAACAGTTTACATTAGCTATACATCACATTGATTGTTAAAGCCTTTTGAAGACACCGCCTTTGTTCACCTTCAGTGGGTAGCTTTAGACAGAAGGATCTAATTTAAGACAGTGACATTTCACCTCATCTTCGGTGGTTGTAAACTCACATGTGCTGCACCTGCCCCCTATATCTTAATATACTGAACTGTTATTACAGAAACTTTTAAACTTGTTCACCAATCGTAACAATGACATTGGACTGATCCCGGTGaggttagattttttttttgtgagggaGGGGGATGTTTAAGGTGCAAGTTTACTGGTAATCCTTTGACTTTGAAGCAGCACTAAGCTGATTTATGCTACATGAACTAATCTGTAATGGAAGCGAACAATCTCCCAAAGAAGAGAAACAAACTGACAAAGGTTACACTGACCTTGGGCTGCCAAGAGAAGTGTTTTATTGAGGTTGATAGTCCTTctattgtttggttttaatgaaAAACCATTAAATCAGTTTCAAGTATTTTTATCTTAGAAAGACACTGTGTGAGTAGCAGTCCATAACACGCCCCTCCTTACTCGTACTAATAAAACACAGCGAAGACAAATTAAGCGGCAGCCTCAGGTTTGTGAAGGCTGGCCATATTCTCTCCCATAGGGCTGTTTAGTTTAATGGCTGCCATATTAAATTGAGTATTTGTTTTAGAATATGCTCTTGGGGAGTTCCAAATTAACATTGGTCCctaaaatgctttgaaaaaatTTTAAAGGAGCTGGCAACATACATTGTTATgagtattacttttattttgtatgtacttATAAAAAGCATCCTCAAGAGTGATGCAAAGATTAGTTCCCTAAaaggctttaaaatatttttctcttgaGACATTAACTTTAATAACCTGGAAAGTTATATAATATGTGCCAAGTACAGCTAAAATCATAAACTGGTAGTCTTTAAAATAAGTACACTGAAAATACCAACTTGAATTTGATGTACTGAAAAGCATTTGTAAGACTAAAACTTTTGTAAGATGAAAAAGCTGATTTTCCAGGTTGTGTggtaatttgttcattttaaaccatATGAATGGCTGTATCACTCAGCGTCCCGGGCATTTTGGAAGGAAAGCTGTCTTAAGCACTGTTGAGTTAACTTTGTGTAATGTTATGAAGTGCTCTGTTCACTAGTAGTAGATCTCATTAAGTTTAAACAAACTTAGTGGGCTGTTCATATAATTGATAATACTGCTTCAACACATAGTATCAGCCAGAATTAAAGAATGTTACAGTTATCTAGATTCTGTATTGGTTAAGTATTTAacattgcaattattttatttactcaaACAATTACACGTGTGAAATGGAGGATGAAGCCTGGATTACTGTTATTGTAAGAAGGGCAGCTGGTGTGAAGTTGAACTCCTATTCTATACATTGAGGTTTCGTATGTTGTGATTGAATTAATGTGAATGATCTAAGTGTTTCTGTTAGCTTCAAGGACCCATGCAAAGAATCAATGTACAATTGAGgcctttaaatgttttctgtaagaCTTTTTCTACTTTcaatttactgtattttctgaGTATATACTTAACTCATCCACTGTGTTAGCCAATTCTTGTCTAGGGTTATCACAAAAATGCTGCATTTATCacttaatgtatatttgtatgataagagaagTATATTTAACTTatgttgtatttgaaataaaagacacaaaatatatagtCTGTATGAGAATATGAAGATCTTTAATATTGCaaatttcacttttca

Function

GO:

id name namespace
GO:0044238 primary metabolic process biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014495 True 5861 mRNA 0.44 12 15735645 15749118

Neighbor

gene id symbol gene type direction distance location
AMCG00014494 NA coding upstream 10205 15715800 ~ 15725440 (+)
AMCG00014496 pdcl3,LOC106586481,LOC102788355 coding upstream 32186 15700154 ~ 15703459 (+)
AMCG00014487 zc3h13,LOC105022574,LOC106573267,LOC106510916 coding upstream 64497 15656929 ~ 15671148 (+)
AMCG00014489 lcp1,LOC106582249 coding upstream 80800 15630190 ~ 15654845 (+)
AMCG00014488 NA coding upstream 118480 15600159 ~ 15617165 (+)
AMCG00014501 NA coding downstream 31471 15780589 ~ 15781550 (+)
AMCG00014500 LOC101071565 coding downstream 74158 15823276 ~ 15870879 (+)
AMCG00014503 NA coding downstream 125465 15874583 ~ 15877671 (+)
AMCG00014505 NA coding downstream 136145 15885263 ~ 15903047 (+)
AMCG00014504 NA coding downstream 158463 15907581 ~ 15916966 (+)
G70496 NA non-coding upstream 6728 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 210630 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 229597 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 234813 15500558 ~ 15500832 (+)
G70409 NA non-coding upstream 284377 15450778 ~ 15451268 (+)
G70562 NA non-coding downstream 169295 15918413 ~ 15918621 (+)
G70637 NA non-coding downstream 487992 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 741293 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 981760 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 1279842 17028960 ~ 17097964 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 49746 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 493312 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1378777 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1530631 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 2046457 13655238 ~ 13689188 (+)
AMCG00014508 NA other downstream 380361 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 716503 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1615680 17364798 ~ 17487050 (+)
G71004 NA other downstream 2522736 18271854 ~ 18274360 (+)
G71525 NA other downstream 7106224 22855342 ~ 22855646 (+)

Expression


Co-expression Network