AMCG00014502


Basic Information

Item Value
gene id AMCG00014502
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15947580 ~ 15954701 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014502
TCTGTTGGGCAGGATTACAGAGCACCATACTTCCAAGAGCAGAGCAGTGCCGGAGGTGTGGACCCGGATGTATGCAGCAGCTTCATGGGCTTGAAGGACCACCTGGATGATGGAATAGACAGCATCCTGTACCTGGGTCTGGATTTGGATTACCTACATGTGGAAAGCACAGACCGACAGTCTGGCCTGAGCGATCCCTGGTCCGGGAGAGAGAAGCCTGTGATGGACAAAGTGGAGGGAGTGGCAGGGTCAGCAGAGGACACCTGCAGCAGCTCCCTGGGAGACTCTGAAGAGAGTGCTGGCTCAGACAGTGACATAGAGCAGCTGCCTTGCGCCGAGGGGCCGCCCAGCGGGGGGTCTTTACCCAACACGCACCGGCAGCTCTGTCGGTCGCCATGTGTGGAGCCTCCAGCCAGGACCGAGGAAAGCCAGTCGGATCTAAAGCCCGAGGAGAGCAAGCCACCAGACGCGCTCAGGGAGTACCAGACCAAAGTGGAGTTTGCACTCAAGTTGGGATACTCTGAGGAACAGGTGCAACTGGTGCTCAATAAGCTGGGCCCCGAAGCGCTGATCAATGATATCTTGGGCGAGCTGGTGAAGCTGGGGAGCAGGTCGGAAGCAGAGCAGGGAGGTGGAGGTGTATCCatgtcttcctcctcttccacatgttcttcctcttcctcttcctcctcctcctgtgtttctgtgcctGCTGACACTCGCCGCCCTGAGTCCCCCCCCCAGCTGGAGCTGCTGGATGACACGGATAACCTCAGACCCATCGTAATCGACGGCAGTAACGTGGCAATGAGCCATGGGAACAAGGAGGTGTTTTCTTGCCATGGGATTAAATTGGCTGTGGACTGGTTTCTGGACCGCGGCCATAAAGACATCACAGTGTTTGTTCCTGCCTGGAGAAAAGAACAATCCAGGCCAGATGCTCTCATTACAGATCAGGAGATCCTGCGGCggctggagaaggagaagatCCTGGTGTTCACCCCGTCGCGCCGTGTGCAGGGACGCAGGGTGGTGTGTTACGACGACAGATTCATTGTCAAACTGGCATACGAATCTGACGGCATCATCGTATCCAATGACAATTACAGAGACCTTGCCAATGAGAAGCCAGAGTGGAAGAAGTTTATTGATGAGCGGTTGCTCATGTACTCATTTGTAAATGACAAgtTCATGCCCCCTGATGATCCACTTGGACGCCACGGTCCCAGTTTGGATAACTTCCTGAGGAAAAGGCCTGTTATGCCTGAGCACAAAAAACAGCCTTGTCCTTATGGAAAGAAGTGCACTTATGGGCATAAATGTAAGTTTTACCACCCAGAGAGAGGTACCCAGCCCCAGCGATCTGTAGCTGACGAACTTCGTGCCAGTGCTAAAAACACTGCTGCCAAAAATATGAACGATGCAGGACTGTTCAAGAGCCATAGCATGCCATCAAGCtccaaagcagaaaatgtgtCCGATATCAAGCGTACAGCCCCTAAGAGGCAGTCGGATCCCAGTATTCGCACCACAGTGTACAGCGAGCTGGAAGAGAGGCTGTCGGCCACAACCAAAGCGGAAACACGTTCAGTCCCCTCACTGGTCTGCAAAAGCAACTCCTCTCAACCTCAGAAACAGCCAGCAACCAGTGGCCCTCCATCAATACACTGCTACCCTCAGGATCAAAGAGTCACTATGGTTATGACCAAAAACCACGTTACACCTCCGCTGGCTTACAATGAGCAGTATCCCAAATGTGACTCCCCAGACATGAGCTATTACTCCATGGTGAATGCCTACCCTAACCTAAGTCTGTCAGGGCCCCGCAGCCCGGACCGGCGCTTCTCAGGGGACGCAGAATTCCGGAATAGCTCCGTGGCCTCAGACTGCAGCAGTGAAGGCAGCATGAGTTGCAGTAGCAGCTCCGACTCCTATGCAGGCTACAATGAGCGTGCCTATATGAGCTCCCCGGACCCCTTGCTTGAAGATAACCTCAAGTGCCACCACCACCCTTCTGCACCCCCTCCTCCTACCCACTCCCACCATCATAGTCGCCTCCATTCACAGCCTTTCATCCAGAGCTACCACGACACCTTAACCAGGGCCCAGAGCTTTGGGCATGAGGAGCCCAAATCTCACCTGAAGCCAGCAATGCCCTATCTTCCCCCACATCTCCAGCACCCCCCAGTGGGGGCACGATCCAGTTTCCCCACGGACTACTCTGCCCCACAGAACCCACAGCACTCCCAAAGCTCCCAGATGAGTCGGGCCTTGGTGTCCACCAGGATCGACAGCATCTCGGACTCTCGGCTCTATGACAGCTCTCCGATGCGCCAGAGAAAGCCCTATCCTGGGCAAGAGTGCTTTGGAAGCTGGGACAGTCTGAGTTGGGACACTTATGGCTACCCCCAAGGATACTCGCTGCCCAGCAAACCCACCCAGCCTTGCTATGAGCAATTTGCCTTCCAAAGCATGCCAGAGAACCGGGAGCAAGCCTGGCGGATGCCCTGGAGAAGGGGCCACCTACAGCAGGAGCCGCCTAGCCATACGAGGTACCAGGATGTGCGGGAGAAAGTCTTTGTTAACCTTTGTAACATCTTTCCAGCCGACTTGGTTCGTCTGGTAATGAGTCGGAATCCCCACATGACAGATGCTCAGCAGCTGGCTGCTGCTATTCTTGCCGAAAAGTCACAACCAGGTTACTAAACGGTGACTCGTTTGGTTTGATGTGAACCCCATATTAGTACCACTGTACTAATGTGCTGAGGGAGGTTTGCTACAGTAGCATTTGTCTTTGAATCCTCTACAGGGATGCTTGAATCAAAATCAGCAAAATACCTGTGAAATGtgtataatgttttcattttgctggGGATAGATTGATCCAGTTTTGACAGATGCGTGTCTTTTTACATCCAAAATGAACCAACCTAAGCTGctaataaaatgattttttttttttttcttttgtgcagTTCTACAgaccttaaaacaaaaaaacacttgccAGAGTCTGAAGCTGTTGCTTTTgataaaggtgtctgccaaaaaacaattattattattattattattattattattattatatcagtAAATGGAAAAtttgcttctttttattttggattccCTGCATGTCAGCACAATCAGACCCAGCATTTGACCATATTATATGAATTTCATTATGTTAAAGTGGAGGGCTTTTATTGTATGTCTTGAGGTGTCTgcttaaagtaaat

Function

GO: NA

KEGG:

id description
K18668 ZC3H12, MCPIP; ribonuclease ZC3H12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014502 True 3239 mRNA 0.51 5 15947580 15954701

Neighbor

gene id symbol gene type direction distance location
AMCG00014504 NA coding upstream 30614 15907581 ~ 15916966 (+)
AMCG00014505 NA coding upstream 44533 15885263 ~ 15903047 (+)
AMCG00014503 NA coding upstream 69909 15874583 ~ 15877671 (+)
AMCG00014500 LOC101071565 coding upstream 76701 15823276 ~ 15870879 (+)
AMCG00014501 NA coding upstream 166030 15780589 ~ 15781550 (+)
AMCG00014506 fdx1 coding downstream 53698 16008399 ~ 16036760 (+)
AMCG00014507 NA coding downstream 184772 16139473 ~ 16154656 (+)
AMCG00014514 NA coding downstream 210144 16164845 ~ 16189661 (+)
AMCG00014512 mphosph8,LOC106586589 coding downstream 237222 16191923 ~ 16208140 (+)
AMCG00014513 NA coding downstream 303540 16258241 ~ 16278438 (+)
G70562 NA non-coding upstream 28959 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 218663 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 422565 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 441532 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 446748 15500558 ~ 15500832 (+)
G70637 NA non-coding downstream 282409 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 535710 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 776177 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 1074259 17028960 ~ 17097964 (+)
G70846 NA non-coding downstream 1177362 17132063 ~ 17173062 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 261681 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 705247 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1590712 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1742566 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 2258392 13655238 ~ 13689188 (+)
AMCG00014508 NA other downstream 174778 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 510920 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1410097 17364798 ~ 17487050 (+)
G71004 NA other downstream 2317153 18271854 ~ 18274360 (+)
G71525 NA other downstream 6900641 22855342 ~ 22855646 (+)

Expression


Co-expression Network