AMCG00014503


Basic Information

Item Value
gene id AMCG00014503
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15874583 ~ 15877671 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014503
CAATGCATCCAGTTGCCCTCCGTGCTCCCCCTGTATGCCTTGCAGGGAGATGCAGTACAGCTGAAGTGCGACGATCCGCTTAGCTACCTGGGCTGGTCGGTCCCCCAGGGATTCATCTACCAGTGGATCCGTGATGGCACCAGGGTATCGGTCTCAGTGAGTGAGGGCAGAGTCGAGATGCAGGAGGAGCTCCTGCTATTTTTGCCTGCTCTCACTGGAGACTCTGGGAATTACACCTGCATCCTCAGGAATGACTCATACTGTGTGTCCAGCCCCATCCTTCTGAATGTCTACGAAAGCAAGCTCAACAATCTGGATGACATCTCGTACTTAAATGAAGCAAATCCAGGCACTTTGGGAATGGTGATTTGCCCCGATTTACCAAACTTTCTCACAATGGCCAACTGGGGAGACCTGAAATGGTTCAAGGAATCTACCCCTATAGTATCCTCTGAAGAAAAAACCCGTTACAAGAGAGACGAAATGATTCTCTTCATTCAAGATGTAAAATTTGGAGATGAAGGTTACTACACCTGTGCACTCAATTTTTCATTTAACAACAAGCAATTGAAAGTGACAAGGACGATTAAGCTGCAAATTGCAGGAACACCAACCAAACCAAGTGTAACACATCCCCTCAGCAGCACCACTAGACCATCAGGAGAGCGTATTCCACCGAAGATCATCTATCCGATCAACGACACCTATGACAGCGAGCTTGGCTCCAGTCTGATAATCCCTTGTCAAGTTCTTCCAGGACAGCAATCAGCGCACACAACTGATGTCACATGGCTGGTTAATGGGCTGAACGTTGAAGACTTTTTCATCAGCAGTCGTGTCTTACAGGGAGAAAAGATACTGTATATTGAGAATGGAGCTTACTACATTCAGGTCGATCTCATCATTACTGAATTGCTCAAAGAAGATACAAAATCCGAGTTT

Function

GO: NA

KEGG:

id description
K04387 IL1R2, CD121b; interleukin 1 receptor type II

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014503 True 942 mRNA 0.47 7 15874583 15877671

Neighbor

gene id symbol gene type direction distance location
AMCG00014500 LOC101071565 coding upstream 3704 15823276 ~ 15870879 (+)
AMCG00014501 NA coding upstream 93033 15780589 ~ 15781550 (+)
AMCG00014495 NA coding upstream 125465 15735645 ~ 15749118 (+)
AMCG00014494 NA coding upstream 149143 15715800 ~ 15725440 (+)
AMCG00014496 pdcl3,LOC106586481,LOC102788355 coding upstream 171124 15700154 ~ 15703459 (+)
AMCG00014505 NA coding downstream 7592 15885263 ~ 15903047 (+)
AMCG00014504 NA coding downstream 29910 15907581 ~ 15916966 (+)
AMCG00014502 NA coding downstream 69909 15947580 ~ 15954701 (+)
AMCG00014506 fdx1 coding downstream 130728 16008399 ~ 16036760 (+)
AMCG00014507 NA coding downstream 261802 16139473 ~ 16154656 (+)
G70496 NA non-coding upstream 145666 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 349568 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 368535 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 373751 15500558 ~ 15500832 (+)
G70409 NA non-coding upstream 423315 15450778 ~ 15451268 (+)
G70562 NA non-coding downstream 40742 15918413 ~ 15918621 (+)
G70637 NA non-coding downstream 359439 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 612740 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 853207 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 1151289 17028960 ~ 17097964 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 188684 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 632250 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1517715 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1669569 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 2185395 13655238 ~ 13689188 (+)
AMCG00014508 NA other downstream 251808 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 587950 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1487127 17364798 ~ 17487050 (+)
G71004 NA other downstream 2394183 18271854 ~ 18274360 (+)
G71525 NA other downstream 6977671 22855342 ~ 22855646 (+)

Expression


Co-expression Network