AMCG00014504


Basic Information

Item Value
gene id AMCG00014504
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15907581 ~ 15916966 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014504
ACATTTGAATTCGACTTGATCAGGAGTGTAGATGTACCAAAAACTATCAAAAGACGAGCAGATATTGAAATGTGAACCAGCTGGGCTGTGAAAAGGTTTTCTATGGTCTGAAGTTACACTTGTTGGACACATCCATGACGTCACTATCAGATATCACACACCTTGAGTCTGCCCAGGTGTGTGATCTGCGGACAAGGAGTTCAGTTCACTTACCTGTGAGAGAGACCGCGAAAAAGACACACCATCGGGGATAATGGCCAGAGAGTTCCTCCTTACtttcttgctttgtttcttcTCAGCTTCCTGCTCTGATAATGATGACTGCATGTTGGAAGTGACCACGCACTATGTCCATGTTGGCGAGGCTCTTGTGCTTAAATGTGACATGTATTCATTATACGCGGAGAGTGAGAGCAATCTCACCCTGACCTGGTTGAAAAATGACACTGAACTTCTAAATGATACCAGGCTTGAGAAACATGGGGATAGACTGTGGTTTTTACCGGCAGAGCTATCTGACTCAGGATACTATGTCTGTCAAATAAGAGGTCCTACCGTGTCCTGTAAAATGCAGATGATCGTGTCTGTGGTGAGCGACTCATGCTTCCATAGGGATTACTTCAGCACCAAAGAGCTCTACCACCCGACACTCATTCCCTGCATAGGATGGAGAGATGTCCACCTCTTGGACCAGCAGCCTCAAGTTAAGTGGTTTAAGGACTGTGCACCCTTTGAGAAGAATGGAGATGCAACAGATCCGTATGACAATAAACTCTATGTACGAAATATGACTATCGAGGATGTTGGAAATTACACCTGTCAAATCAATTTCACCCACATGGGGGAAAACTACACAGCATCAAGTACAACAGAGATATCGACTAATGaacGCATGTCACCGGAAAAGCCATTTGTGTTATATCCCAGGAATGTAACCTTTGAGGTTGAGAGGGCACACAGAAGGCACTTTTACTCCCAATTAATGGTGTCCATTATTCCCCTGATAATAGCAGTAGTGTTAATTTACTACTTTTTCAAGGCTGACATTGTCCTGCTTTATCGAAAATTGCGCTTTATGACCCGGACAAGAACAGTagCAATGCACAGCATCATTGAAGAGTCCATAAAGAGAAGCAGGAGACTGATTATCATCCTCTCATCTCATGTTCTGGAGGATCAAATACCAACTGCCTTTGAGCCACAGATGGGGTTGTATGCTGCCCTGATTGCATGTGGAATCAAAGTTATCCTCATAGAAATGGATAAAAACATTGACTATTCACTTCTGCCAGAGTCTGTCAGATACATCAGACAAAAGCAGGGAGCCTCACGGTGGGTGAGGCACAATAAGGAGTGTCAGCTGTCACCAAATACTCGTTTCTGGAAGTCTGTGCGATACCAAATGCCACCTGAGCCAGGACTGGTACATACATAAAGTTACCTGAAGGCTCCAAACAATAACttacataaacattttacaataaataaacatttgatgattgtattcattttgtataaCTACATAAATAACACCTTGATAGTCACATTTTTCTTAGACTGCTGCCAGTTTGAGTCTGCAGTGACAGAGACCTGTGTTACCAACAATGTTCACTGGGTGGCTTAGGTGTTGCAAACATCTGACTGATGTGTAGCTTCTGAAATGAATGTTTTGCTCTGTAAAAGCGTAAGGTATTCTGCAATGAGTTCCCAATGTGTGGGATCATTTGAATGTTAGCTGTTATTAAGACATTTTGGGCAGAATATTGATATGCACCAAGATGcataatttcaatttaaatttaaaggaCCAAATACTTAAAGAACCATTGCAAATGTTAAATGGTTAGTTTAATCATTTGAATGATGATATAGTTCAgtttaatgcaattaatgtgTCAGCAACAACTGTATCTAAAGCCagtgaaaataatgcatttaaaaagtgtaaaatataacTACTTGCTCAATTTGTAACAGATAAGCTACACAGCATTGATCATGATTGCACTGCAATACTGGTATAGGGCAATACTGAGCGTGTGCCTGCAGTTTTTTGCTAAATCTACTTTTGGTTACATTGCATCAAGGTGATGGTTAAATTTTGAGGTTACAGTATATCATTATCATCCTATCATTTTTATGAAGGTATATTcttgacattttcattataagGCTGTAATGACTTGCTTTCTGAGAAATCCTGTTTGTGACCAAAACTTTTCATTGCTAAGCAAATTTTTGAAGCCCAGCAAATACAAGAGCATGAAAGAGCTGTCTAGTATCCTTCCTGTCTTTTGAAACACTTTATCTAGCAAGACATCAGAAAATAAGGAGGCTGTACTTTTTAATCGTTGCTGACTAAAAGTTAATATCACATTACCAAAGTGTAACATGACCAATATCCACAATATGTTCACTGAAGGAGGATGTACTGTATGTTTGTAAAGCCATTCCCTTGCCCAGAACAGTTGTTACACTTTATTATCACCATTCTGTTGTTGTATAGTTTGTTTACAAATGTCTACTAAGATCAATTTATGGAAAAGCATTCTTGGAACACTGCATTGTGTTCTGCATTCCCTTATTCTAGCCTTGGGGAATGTTTATCTATGTTAACagtatgaattaaaatgtaacaaaaatctataaaaatgcAGTTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014504 True 2663 mRNA 0.39 8 15907581 15916966

Neighbor

gene id symbol gene type direction distance location
AMCG00014505 NA coding upstream 4534 15885263 ~ 15903047 (+)
AMCG00014503 NA coding upstream 29910 15874583 ~ 15877671 (+)
AMCG00014500 LOC101071565 coding upstream 36702 15823276 ~ 15870879 (+)
AMCG00014501 NA coding upstream 126031 15780589 ~ 15781550 (+)
AMCG00014495 NA coding upstream 158463 15735645 ~ 15749118 (+)
AMCG00014502 NA coding downstream 30614 15947580 ~ 15954701 (+)
AMCG00014506 fdx1 coding downstream 91433 16008399 ~ 16036760 (+)
AMCG00014507 NA coding downstream 222507 16139473 ~ 16154656 (+)
AMCG00014514 NA coding downstream 247879 16164845 ~ 16189661 (+)
AMCG00014512 mphosph8,LOC106586589 coding downstream 274957 16191923 ~ 16208140 (+)
G70496 NA non-coding upstream 178664 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 382566 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 401533 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 406749 15500558 ~ 15500832 (+)
G70409 NA non-coding upstream 456313 15450778 ~ 15451268 (+)
G70562 NA non-coding downstream 1447 15918413 ~ 15918621 (+)
G70637 NA non-coding downstream 320144 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 573445 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 813912 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 1111994 17028960 ~ 17097964 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 221682 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 665248 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1550713 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1702567 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 2218393 13655238 ~ 13689188 (+)
AMCG00014508 NA other downstream 212513 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 548655 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1447832 17364798 ~ 17487050 (+)
G71004 NA other downstream 2354888 18271854 ~ 18274360 (+)
G71525 NA other downstream 6938376 22855342 ~ 22855646 (+)

Expression


Co-expression Network