AMCG00014505


Basic Information

Item Value
gene id AMCG00014505
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15885263 ~ 15903047 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014505
AGGATTTCTCTCCACAGAGAGCAGAGGAGATACTTGGAAAGCAGTAAACTGTGTCCCTGGGCACTAGACAGCACATGCGTACAGCTGTCCCACTGACGAGAAGTTGCTCAATCTTTGCACAGGCACAGATTTTCAAGGAAATTGCGAAACACTGCTCCGCTCCAGAAATGCACTTATACTTCGGCAGCCGTCGGGAACAAATGGACTGACATCCAGTTATGCTTATAAGAGATGTCGGTGTCCTTCACCTGTTTTCAGATCCTTGTGGCACTGCTTACAACACATAAACTGAAGATACAGATATGGGCCCTGCATTGCTTTTCATCCTGTTGACTATCTCTGTACATGTCGACTCTCAATTACAGGAAGATACTAAAGAAGAGCCCTGCACAGACTACGGTGTGGACTTTGAACGCGTCTACACCATGGAGGGAGAGGCTGTAGTGATGAACTGTTCCTTGCTGGTAGCTCTGCCATTCAACTCCAACACTACATACACCATTTcttggtttaaaaatgaatctcaAAAGGAGTTCACAAGAGCAGAGGCCAGAATACAGGCAGTTAGAGAATTGCTCTGGTTTCTCCCTGCCATTTTGGAGGACACGGGCCACTATGTGTGTGTTCTCGGAACCCCTCAAAGCTGCTATAAACAGGCAGTACTCCTGATTGTGAATGAGACCAAGAATGATGACTGTAACTACATCTATAAGGCCGGTCAGCAGCTCGCAGTGTCAGCAAATGGGAATATAGTTTGTCCTGCAATTAACATATTTGTGAGTGAAGCAAGCAGTTACGAATTCCTGTGGTACAGGGATTGTGAGCTAATAAAGGAAGGAAGCAAGTTTCTGTATCGGAATGACTCCCTTTTGATTACAAATGTTTCTGTCAAAGATAAAGCAAATTATACATGTAgagtgaattttattttaaatgggacAACATACTATGCATCAAGGACTTTAGAACCTGAAATCAAAAAGTCTGATGGAAAATCCTATGATGCTTATGTAATCTACCCAGACATATACGAGGGGCAGTCTGAGACGAAGGCAGAAGTGTTCGCCCTGCACACTCTGCCCCAGGTCCTGGAGAGGAAGTGTGGGTACAAGCTCTTCATCTGTGGAAGGGATGGATTACCTGGAGAAGCTGTGGTGGATGTTGTCACTGAGAACATAAAGAAGAGCAGAAGACTCATCCTGCTTTACACCTCGAGCACATTCTTCAGTGCGGAGAGCCATGCGCGCTTTGAGCAGCAAAGTGGGATGTACAGCGTATTAGTAGAAGGGACAGTGCCAGTCATCCTGATCGAGCTGGAGGAAATAAAGGATTATTCAGACCTTCCCGaatcaatacaacatttaaaacggAAGCAAGGAGCCCTAAAATGGAAAGTTGGAAAGTCTGACAAATCATTTTCCCCATGTTCAAGGTTCTGGAAAcatgtacaatacaaaatgcCACTAAGACAAAGACCCTCCTATTCAGAAAAGAGTACAGCGTTGAACTGTTGGACCTGTACTGGTACTGGGGATGTTCTCAATCACCATATTCCCTTAGGGTGACTTTGGATAATTTGAAATCGCAGGTTTGCGCCCCAGCATTTTGACAATTTCATTCTGCCTGGGCGGTGGAGTGAGCTGAAAATGATGTCATTGATACCCTTTCACTTGGACTATCAATCACATTGTTTATGGATTCAAATGTGGCAAATCTGCAGTGGATTAGTTTCCAGCAGAGAAGGACCCCAAACCCAGGAAGCCTCATTCTAGTTTATGCAGTAATcctatttactttatttgttttgttgttgtttgttttttaaataaaatacagtaaatacttTGACCTGCAGTGGTTATATCTTGTAAGAGAACTCATGTAATATCTGCTGATTCCAAGCTatatccatacatacataattacatagCAATACTGGCTCAAGTCTCACTGTCACACCTAGTGCCCTG

Function

GO: NA

KEGG:

id description
K04386 IL1R1, CD121a; interleukin 1 receptor type I

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014505 True 1970 mRNA 0.43 8 15885263 15903047

Neighbor

gene id symbol gene type direction distance location
AMCG00014503 NA coding upstream 7592 15874583 ~ 15877671 (+)
AMCG00014500 LOC101071565 coding upstream 14384 15823276 ~ 15870879 (+)
AMCG00014501 NA coding upstream 103713 15780589 ~ 15781550 (+)
AMCG00014495 NA coding upstream 136145 15735645 ~ 15749118 (+)
AMCG00014494 NA coding upstream 159823 15715800 ~ 15725440 (+)
AMCG00014504 NA coding downstream 4534 15907581 ~ 15916966 (+)
AMCG00014502 NA coding downstream 44533 15947580 ~ 15954701 (+)
AMCG00014506 fdx1 coding downstream 105352 16008399 ~ 16036760 (+)
AMCG00014507 NA coding downstream 236426 16139473 ~ 16154656 (+)
AMCG00014514 NA coding downstream 261798 16164845 ~ 16189661 (+)
G70496 NA non-coding upstream 156346 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 360248 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 379215 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 384431 15500558 ~ 15500832 (+)
G70409 NA non-coding upstream 433995 15450778 ~ 15451268 (+)
G70562 NA non-coding downstream 15366 15918413 ~ 15918621 (+)
G70637 NA non-coding downstream 334063 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 587364 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 827831 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 1125913 17028960 ~ 17097964 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 199364 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 642930 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1528395 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1680249 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 2196075 13655238 ~ 13689188 (+)
AMCG00014508 NA other downstream 226432 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 562574 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1461751 17364798 ~ 17487050 (+)
G71004 NA other downstream 2368807 18271854 ~ 18274360 (+)
G71525 NA other downstream 6952295 22855342 ~ 22855646 (+)

Expression


Co-expression Network