AMCG00014507


Basic Information

Item Value
gene id AMCG00014507
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16139473 ~ 16154656 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014507
ATGAAAGTGTTTGGGGAGGATGGGGACACGTTGCTGGTGGATCTGAAGAAATCTCCAAGGGACAAGATGGCCACTGACATGCCAGCAGACAAAATGGAGACCCTCATTCTAATGTCAAAACTTCAAGATTTCTACTCTCAAGGAGGACACGGATTAGAGATTAACAGCCCCTATCTTGACCAGGCCTGCGTAGCTCTGTTTGAGGATAAGGTTTGGTACCGGGCACAGATAATTGGTCTCCCTGGAAGCAGGACTGTGGAGGTCAGGTTTGTGGACTTTGGAAACCACATGACCCTGTCAGTGAACAACGTGCGAAAAATTAAAGATGAGTTCTTTGCTTTACCAGCAATGGGGGAGCAGGAGAACCTTCCAATCAACCCCGATCTGGAGCTTCCTGACAGCCTGAAGGACATCCGAGTAAAAGTCACTCATGTCAAATCTCCAGGAAGCTTTTTTGTTCAGCTTCTTCAAACTGATGGTCAGCTTAAAAGGATACACCTGAAATTGAAGGAGGAGTTCTCCAAATCGGACCCAGTGCTAATGGATTGGAAGGAGAACATGCATTGTGCTATGCTGATCAATGGGGTCTGGGAGAGAGGAAGTATAATCACTACTTTCCCTGGAAATATAGCAGAgGTAAAGCTCTGTGATTTTGGAAACCATGTGCTCTTACCCTTCAACAACCTGAGACCTCTGCACCAGGACCTCATGGGGTCTCTGGCTTTAGAGTGCTGTCTGGGAGACATCagGCCTGCGGGGGGCAGCAGCACTTGGACGGCCACGGCATGCGACTTCATTTCATTCTACTTAACTGGAGCTATGGCGATCATGACTGTTAAGCTGGAGGACATCCCCACAGTGGAGGACTGCTCTTATGGTGAGGAGTCGGCCCCTATGCCTCTGTATTGCCCCCCTGCTGCGGCCCACAGAACCTTTccgaagagagagaggagccagCCCTACAGCCCCCCCGACCTCCCGCACTGTGGCCGAATGCAGGTGCTTGTCACCCACGTTGGGGATGACGGGGTTATCCATGCCATGACCAGCCACGCAGAGCAGATATTTGAGACGCTTAAAACAGACCTCCAGCAGCATATTAAATCTCTTCCTCGCCAAAGGCCTTACAGCTGGGCGCTGGGCCACGGCTGTGCAGTGATGGGCTCTGACATGCTGTGGTACCGAGCAGAGGTGCTGGAGGTGATGGGTGGGAATGTGAAGGTGCGGTATGTGGATCAGGGGCTGATCGAGAACATCCCCATGTGCCACATCATCCCCACGGTCCTGTATAAGGAAGTGCCTCGGCTGTGCATTCCCTGTCAGCTCCATGGAGTTATACCTGTTGGCACAGTTTGGCAGACCGATGCAGTTGCTTTGCTAAAAGAGTTACTTCAGTGTCGATCTGTTGATATGCAGATCATGGAGCTGCCCTCAGAGCCGCTTGGCAAGGTGACAGTCCAGATCCATTTTGACGGGATGACTCTGAGTCGTATCATGGAGCACCATCGGCACGCCTCGCGGGACCCCTCTGTCAGCGTGCCTGAGGGACTGACAGACGAAAGGCCGCTGCCGGGACTCTTCACTTATCCTCCATTCCCAGACACTGGAGAGCACTTTCCTGTCAGAATCAAACACATCCGCACCCCTAACGAGATCGTCCTATGCCCTGCGGTGGAGTCGGCGAGTGTGGCAGACTCTGAGGGCCTGGACGCAGCTCTGAAGCGGGTCAACGAAGAAGTGCACAGCCTGCCGCTGCTCACCGATTTCTCCTCAGAGGCCCCATGCTTGGCAAAATACAGTGATGGCAAATACTACAGAGCAAAGTTACTCAAGATTGAGAACTTCAATCCTGTTAAAGTCCTAGTGAGGCATGTTGACTACGGTTCAGATGACTCGTTGACCACAGACTGcctGCGTGAAATCCCTGTGGAGCTCCTGCAGTACCCGTGCCAAGGAATCGAAGTGAAAGTGGCCGGGATTAGGCCGCCTGAAGTTGATGATGAAGAACAGAGGTTGTCCTATAAACCGGAGTGGAGCTTAAAATCCATAATCGAGATGATGGATCTGCTGCATGGAAAACAGCTGACTGCATCTGTGCTGtCAACAGAACCCGAAATCACAGCACATCTGTATGATGAAGACGAAATGCTGGTACTTTTGCCACTCGTGGACAAAGGTCTTGCTGATTTAATGTAG

Function

GO: NA

KEGG:

id description
K18405 TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014507 True 2196 mRNA 0.52 17 16139473 16154656

Neighbor

gene id symbol gene type direction distance location
AMCG00014506 fdx1 coding upstream 102713 16008399 ~ 16036760 (+)
AMCG00014502 NA coding upstream 184772 15947580 ~ 15954701 (+)
AMCG00014504 NA coding upstream 222507 15907581 ~ 15916966 (+)
AMCG00014505 NA coding upstream 236426 15885263 ~ 15903047 (+)
AMCG00014503 NA coding upstream 261802 15874583 ~ 15877671 (+)
AMCG00014514 NA coding downstream 10189 16164845 ~ 16189661 (+)
AMCG00014512 mphosph8,LOC106586589 coding downstream 37267 16191923 ~ 16208140 (+)
AMCG00014513 NA coding downstream 103585 16258241 ~ 16278438 (+)
AMCG00014516 ift88 coding downstream 191378 16346034 ~ 16370627 (+)
AMCG00014517 NA coding downstream 217097 16371753 ~ 16373757 (+)
G70562 NA non-coding upstream 220852 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 410556 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 614458 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 633425 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 638641 15500558 ~ 15500832 (+)
G70637 NA non-coding downstream 82454 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 335755 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 576222 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 874304 17028960 ~ 17097964 (+)
G70846 NA non-coding downstream 977407 17132063 ~ 17173062 (+)
AMCG00014508 NA other upstream 441 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 453574 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 897140 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1782605 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1934459 14189564 ~ 14205014 (+)
AMCG00014525 NA other downstream 310965 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1210142 17364798 ~ 17487050 (+)
G71004 NA other downstream 2117198 18271854 ~ 18274360 (+)
G71525 NA other downstream 6700686 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 10750221 26904877 ~ 26911237 (+)

Expression


Co-expression Network