AMCG00014508


Basic Information

Item Value
gene id AMCG00014508
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16129479 ~ 16139032 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014508
CTCTACGGTCCCGCCCTTTTGCACATGCGCATTCCCGCCTACGTTAAAAACATTGCGCCCACCCTGAAAGCCCGTTGTGGTGGAGACGTCCGTGTGGGAGTGACGCCTGAGGATGAGATAGTTGGAAACCTACCACATGTCCTAGTTTGTGGGCATGTCTTCTGCGCGTCATGTCTGCGGTCACTGGCAGATCATGATAAAGCTGTAGTTTGTCCAGAATGTGAGGTGGAAACTCCACTGGATGATGGGGGAGTAGATGCACTTCCAGGAGACTCCAGGATAATAGGAATGATCTATACTGCCAAAATGAATACAAGGAAAACCCGTGTTAATGTACCATTTGATGGTGAAGGGCTGAAGGTAGAGAAACAAATACCAGCTGAGCCTTCAGACTGCACAGCTGGGGAAAAGGCTGCACTGGAGTGGGTGTTCGTTACCCATGTGGTAAACCCAAACCATTTCTACATAAGAAGACTTTCAGAGAGCAAGGCTGCAGCTGTGCTGACCAGAAGgatcaatttgttttgtaatgggGAGAGAAATATTTTTAATCCTAGTGATGTTCTGGAATTAGGTTCTACAATCTttgtgaaatggaaagaaaacatgtGGTGCAGAGCAACCATAATGGAACTTTTCCAAGAGTGCAAGGAACCCCGGGCTGTACCAAGGTGTACCATGGCAGAGGTTTCTGACCTCAAAGtcttttttgttgattttggcTTCAGCAAAAGGATACCTCCTGCAAGATCTGAAAACCATTCTGAAGCAGAAGACGGTCATGTTCTGGACTTTCAGTTGGACATCAGTCAGTGCATTAGAAAACCTGACCTCGCAACTCGTGCTGAAATGAACAAATGGGCTTCATTGTCCATCAGATGTTCACTCAAGGACATTGTACCTGCAGACTTGGCAAGAGAATTTACTTTGACATGTCTCttttataagaaaataattgtagtaAAGGGGCTCCCCTCAATACTTTAA
>TU88218
AAAACATTGCGCCCACCCTGAAAGCCCGTTGTGGTGGAGACGTCCGTGTGGGAGTGACGCCTGGTGACTCGACGATCTGTTTATTGAAGAAGTGCGGGGAACATGTCGGAAAAACAGGATAGCCACAGCTCTCTCATATGTTATATCTGCGCCAGGAAATACACACTACCAGAGGATGAGATAGTTGGAAACCTACCACATGTCCTAGTTTGTGGGCATGTCTTCTGCGCGTCATGTCTGCGGTCACTGGCAGATCATGATAAAGCTGTAGTTTGTCCAGAATGTGAGGTGGAAACTCCACTGGATGATGGGGGAGTAGATGCACTTCCAGGAGACTCCAGGATAATAGGAATGATCTATACTGCCAAAATGAATACAAGGAAAACCCGTGTTAATGTACCATTTGATGGTGAAGGGCTGAAGGTAGAGAAACAAATACCAGCTGAGCCTTCAGACTGCACAGCTGGGGAAAAGGCTGCACTGgatTCATGCACCTTAAAAGCTCTGGATGATGCTTTATTGCTTGCTTCTAAAAACTTAAGTACGCTTCAGAATTTACACGAG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014508 True 987 mRNA 0.45 7 16129479 16139032
TU88218 False 564 TUCP 0.47 5 16129525 16132802

Neighbor

gene id symbol gene type direction distance location
AMCG00014506 fdx1 coding upstream 92719 16008399 ~ 16036760 (+)
AMCG00014502 NA coding upstream 174778 15947580 ~ 15954701 (+)
AMCG00014504 NA coding upstream 212513 15907581 ~ 15916966 (+)
AMCG00014505 NA coding upstream 226432 15885263 ~ 15903047 (+)
AMCG00014503 NA coding upstream 251808 15874583 ~ 15877671 (+)
AMCG00014507 NA coding downstream 441 16139473 ~ 16154656 (+)
AMCG00014514 NA coding downstream 25813 16164845 ~ 16189661 (+)
AMCG00014512 mphosph8,LOC106586589 coding downstream 52891 16191923 ~ 16208140 (+)
AMCG00014513 NA coding downstream 119209 16258241 ~ 16278438 (+)
AMCG00014516 ift88 coding downstream 207002 16346034 ~ 16370627 (+)
G70562 NA non-coding upstream 210858 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 400562 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 604464 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 623431 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 628647 15500558 ~ 15500832 (+)
G70637 NA non-coding downstream 98078 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 351379 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 591846 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 889928 17028960 ~ 17097964 (+)
G70846 NA non-coding downstream 993031 17132063 ~ 17173062 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 443580 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 887146 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1772611 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1924465 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 2440291 13655238 ~ 13689188 (+)
AMCG00014525 NA other downstream 326589 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1225766 17364798 ~ 17487050 (+)
G71004 NA other downstream 2132822 18271854 ~ 18274360 (+)
G71525 NA other downstream 6716310 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 10765845 26904877 ~ 26911237 (+)

Expression


Co-expression Network