AMCG00014513


Basic Information

Item Value
gene id AMCG00014513
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16258241 ~ 16278438 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014513
ATGGACCAAGGTTTTTCCAATGGTTTGGAGCCCAAGCTCGGTGCAGAAGAAAGCAACACGGCAGCAGAGGAGGAGTCTGCCATGGACACGGGAGTCCCAGAAGTTGAGACGGTTGCAGCGGTCCAGGACACCACGTCAGCCCCTGACGATCTCCAGCACACCTCGAAGGTGGCAGAGGAAGATGACGATGACGTAGTGTTCATAGAGCCACTTCCTTCAGCACAAGAGGAGAGCACGCCGACCCTGGTTCCCAGCACTGGCACCGCTGCCGAAGCCCCCGTTTCCCAGACTCCAGACCGTGCCGAGGAGACTGCTACAGTGCCTCAGCACTCGCAGGATTACACGCCTCCTCCGCCTCCCATGACTTTGGCCAACAGTCACGGCGAGACCATCGTTATAGATGATGAGGAAGATGCTGAGCTGACGTCTTTGCAGCAGCCCACCTCATCCTCTGTCACTGGAACCAGGGCTGGTCAGGAGTCCAATGCTGCTGCGAGTTCTGCTGAGGCTACAGAGGCGATGGAGAGCCAGGTGGTGGCAGCTGTGCAGACTCCACTGAGCAGCACGGAGCCAGACTCTGAAATCCAGATCGCCAGCGTGACAACGCTTGACCTGGGGGCTAGCCTTGGCAGTGGTGGCCAGGGAGCCTCTGTACCTGGTGCCCGGGTCGATGGGGACATGAATCTGATGATAACCAGTGTCACCTCTCTGCACAACAGCAGCCTGGCGGAGGTAGGCAATGGGTTGCAGATAAGCAACACCTTCAGCCTCAACCCAGATGCACAGAGTGCTCCCACAGCCTCACACACTGACTCCAGCAGGCCTGTGGGCCATTCCAGCACGGGGACTTTCAATCCAGGAAGAGTCGGCACAGCCAGGGAGGCTGCTCAGAATGGGGAAACGGGGACCCACCAGAGACCTGATTCGTGGATATCCCAGTCAGCCTCTTTCCCCCGAAATCAAAAGCAGCCAGGTGTTGATTCTCCATCTTCTGCGGCTTCCTTGCCAAAATCTGTCTTTCCGCCTCCAGCCTCTCAGCAGCCCTCTAAGCCGGTCAAAGTCACCTGTGCGAACTGTAAAAAGCCGCTGAGGAAAGGGCAGACGGCATACCAGCGCAAAGGCTCGGCCCATCTCTTCTGCTCGACCACCTGCCTGTCAGCCTTCTCCCACAAGCCTGCCCCCAAGAAGAACTGCACAATGTGCACAAAGGACATTACTACCATGAAAGGAACCATTGTTGCTCAAGTGGACTCCAGCGAGTCCTTCCAGGAGTTCTGCAGCACTGCTTGTCTGTcctcatatgaaaataaacagaatccTCCCAAAACCCCCATCAAGACCAGGTGCACGGTCTGTGGGAAACTAACTGAGATTCGCCATGAGGTTAGCTTTAAAAACGTCACCCATAAGATATGCAGTGATCACTGCTTTAACCGGTATAGAATGGCCAATGGTCTCATTATGAACTGTTGTGAACAGTGTGGAGATTATTTGCCTAATAAATCGTCTGCAAATCATTTCCTTATAATTGATGGACAGCAGAAACGGTTCTGCTGCCAGAACTGTGTTAAGGAATACAAGCAGACTCATGGCAAAATAACATGCTGTACAGGATGCAGAACTCCATGTAGATTTTTCGACATTACTCATTGCATAGGACCCAGTGGTAATATGGAGCCCTACTGCTCTACTGCGTGCATGAACTCGCACAAGTCCAAGAACTCCAGTCCTGCAAGTTCTGGTGCAGCACCTGCATGCCATTTTTGTAAAAGAAGTGCATTACCTCAGTATCAAGCCACACTGCCTGATGGGAAGCTTTATAACTTCTGTAGTTCTAACTGTGTGACAAAATTTCAGACTTTAAGTGTTCAGTCCTCAACAAATGGGCAGACTGCACATTCCTTGAATAATATCCAGCTGAAATGCAATTATTGTAGAGGAGCTTTCAGTTTAAAGCCAGAGACGCTGGAGTGGGAgAATAAAGTCTACCAGTTTTGCAGCAAAACTTGCTGTGATGACTACaaaaaactgcactgtattgtaacaTACTGTGAATACTGTCAAGAGGAGAAAACTCTTCATGACATGGTGAAATTCTCAGGAGTGAAAAGACCTTTCTGCAGTGAAGGCTGTAAGCTGCTGTTTAAACAGGACTTTGCAAGACGATTAGGTCTGAAATGTGTAACCTGCAGCTACTGTTCCCAAATGTGTAAAAGAGGAGCCACTAAAGAGATCGATGGGATTATGCGAGACTTCTGCAGTGAAGCCTGTTCCAAGAAGTTTACAGACTGGTATTACAAGGCTGCGCGCTGTGACTGCTGTAAAGTGCAGGGCAATCTTACGGAGTCTGTACAGTGGAGGGCGGAGATGAAACATTTCTGCGACCAGCACTGTTTGCTGCGCTTTTACTGTCAGCAGAACGAGCCCAACATGTCCACCCAGAAAGGCCCTGAAAATATGTCCTTCGgGCAAGGAACGCAAACAACGAAAAGCACCgGATCAAATCAGACTTCATCAGTTTCATCTTACTCCAATTGTGGGATAAAGGATGTGAAGAACAAGGCTGTGCTGTGTAAACCTCTAACAATGACGAAAGCCACATATTGTAAGCCGCACATGCAGACGAAGTCCTGTCAGACAGATGAAGTAGTGAAGACTGAGTATGTTCCAGTCCCCATCCCTGTGCCTGTGTATATCCCAGTGCCCATGAACATGTACAGCCAGATTACCCCTGCTCCAGTGACGCTACCCGTTCCGGTTCCAGTGCCAGTTTTTTTGCCCACTACACTGGATAGTGCAGAGAAGATTGTGCAGGCCATTGATGAGCTCAAGGCCAAGATTCCCACAGATCCGCTGGAGGCTGACCTTTTGACCATGGCTGAAATGATAGCCGAGGCAGATGAGAAGCCAGACAGTACAGATGTGAAAATTGAAAGCCAGAAGAGTGAAGGGGCCAGTTCAGATGAGAAAGAAGAGCCAGATGATTCTTATGAGCCTGAACTGGATTTGGAAAATGATTTCCCTAGAGTTCCCGATCCGGTTGTAGAAGAACTTGATAGTGAAATAGCGTTCATGTTGCCTCCTGTTTTGGGAGAAGAAAATGAAGAGAAGCCTCGACCTCAAGTTAAAAAGAAGGGATACAAGAGAAGAGCAGCTGAAGATAATTCCCATGTAATTTGGCCTGAAACTCCAGACAGTTTGTTTGCCTTAAAATCTACTTATGGCATTAATGCTTGGAAGCGATGGGTGTCAACTACAGCTACAGCTGTAACAGAAGGCACAGAGGATAACCAAGAACAGgaacaaccaaaacaaaCAAAACCAGTGAGATTAAAAAGAAACCTCCTGTCACATTCTGCTGCTGAACTCAACTACGGACTCTCGCGCTTTGTCAGTGAGGTTCGAAGGCCAAACGGGGAGAGCTATGCACCTGATAGCGTCTTTTATCTCTGCCTTGGCATCCAGCAGTATCTGCAAGAAAATGGAAGAACTGACAACATTTTCACTGATCCATATTACCAACTATTTGGAcaggaattaaataaaacactcaaaGACTGGCAACCAAGTGTACTTCCTGATGGTTCCTTATTCTGCAGAATTGAAGAGCAGTATTTATGGAGCAGTAAGCAGCTTGGAGAACATTCCCCAATGGTTTTGCTCTCTACCCTAGTCTATTTTAACACTAAGTATTTTGGCTTAAGAACCGTGGATCAGCACTTGAGGCTTTCGTTTGGAAATGTTTACAGGCAGTGGAAGAAGAACCCTCACACTAAAGATACCACTGTCTGCATTCGGATACCTTCCATTTTTGAGGATGATCTAGaaaaaacagtatcaagaaaaagaaaacgcaAAGATGACGACACTGATCCTGATTATGAACCAGATGACGGCTCTGGAGGTGGATCTCACTGCCCAGTAAAAAAGCATGAGTGTCATTTGTATGAGCTCTACCTCTCTAAATGtCCAGGGAGTCTTAAACAAAGAAtggatacattttacatgaaacCCGAAAGCTCCAGTGCCCCGGACAGCCCATTATGGTACAGCACTACAGCCCTGGAAAAGAACATCTTGGAAAGCATTCTCACCCGCATTCTCCTCATCAAGGAGGTTTACAACGAAAGGGACTCTTCGGACCCAGAAGACAGCGAATGAACCTGCAGACACTTGTGAACTTACCAGGAATATACAGCATTAGGAGGATGCGCCCGCCGCTCCACTTTCTTAGGGAAAAAAATCTCAACTCCATACACATGTAGCATTACACCCAGATTGGGTACagttctgtaaatattttttaagtggGGGAGAAATTGgtgttatacatttattattttagcatACTAAATGCTCCTTActgaaaccttttaaaaatatatatttattgattaggTTTATTTGTAACTTTTTACATAACGGAATTTGAATGAGAATGTGccatgtttattgttttgttccgTTTCTCCCCTTCTGGGTAAGAGCATTAAATATTGCTGCAGCTACAGTGATTTAaaagtctctccctctctttcgcTTTGGAAAATGGGGATTTTTTTCCCTGGACAGTTTCTACTAAAGGGATGATGTAATAGTCTTTACTTTAGCACTATTAAAGACATTTAGAAAACTCGCTTTTTGTTAAGGGTATTTTTAATGGCAGTACAAGGGAAAACCAGAActtgacagttttgttttaatacaaagtGGATGTGGCAATGTACTAAGAAATCTGACCCATAGGAGGCAGTAGTGAGGCTCAAACACTTTGTCAGAAAGCTGCTATGTAATCGGG

Function

GO: NA

KEGG:

id description
K24675 ZMYM2_3_4; zinc finger MYM-type protein 2/3/4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014513 True 4798 mRNA 0.47 22 16258241 16278438

Neighbor

gene id symbol gene type direction distance location
AMCG00014512 mphosph8,LOC106586589 coding upstream 50101 16191923 ~ 16208140 (+)
AMCG00014514 NA coding upstream 68580 16164845 ~ 16189661 (+)
AMCG00014507 NA coding upstream 103585 16139473 ~ 16154656 (+)
AMCG00014506 fdx1 coding upstream 221481 16008399 ~ 16036760 (+)
AMCG00014502 NA coding upstream 303540 15947580 ~ 15954701 (+)
AMCG00014516 ift88 coding downstream 67596 16346034 ~ 16370627 (+)
AMCG00014517 NA coding downstream 93315 16371753 ~ 16373757 (+)
AMCG00014524 sap18,LOC107597378,LOC107668906,LOC107569214 coding downstream 158739 16437177 ~ 16438737 (+)
AMCG00014522 NA coding downstream 170225 16448663 ~ 16450651 (+)
AMCG00014523 NA coding downstream 195356 16473794 ~ 16481556 (+)
G70637 NA non-coding upstream 17903 16237110 ~ 16240338 (+)
G70562 NA non-coding upstream 339620 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 529324 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 733226 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 752193 15505814 ~ 15506048 (+)
G70735 NA non-coding downstream 211973 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 452440 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 750522 17028960 ~ 17097964 (+)
G70846 NA non-coding downstream 853625 17132063 ~ 17173062 (+)
G70865 NA non-coding downstream 971881 17250319 ~ 17253671 (+)
AMCG00014508 NA other upstream 119209 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 572342 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 1015908 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1901373 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 2053227 14189564 ~ 14205014 (+)
AMCG00014525 NA other downstream 187183 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1086360 17364798 ~ 17487050 (+)
G71004 NA other downstream 1993416 18271854 ~ 18274360 (+)
G71525 NA other downstream 6576904 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 10626439 26904877 ~ 26911237 (+)

Expression


Co-expression Network