AMCG00014520


Basic Information

Item Value
gene id AMCG00014520
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16308288 ~ 16308806 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014520
ATGCACGTGGCTTACCGGAAGCGTTTGGTAAAACGAGACATTTTGCTGAGCCACGCTGAAACGGAGGCCGGTGATCTGGAGGAACTCAGGAAGAAACGTTTGTCCATCGCCGGCCCACTGTGGTGGACCTACACCACCAGCCTCTTTTTCAGGCTGGTGTTCGAAGGTGGCTTCATGTACGTCTTTTACTACCTCTACAATGGCTTCCAAATGCCTCGGCTAGTCAAGTGCGAAGCCTGGCCCTGTCCCAACACGGTGGACTGCTTCATCTCCAGGCCCACTGAGAAGACTGTGTTCACCATCTTCATGATTTCCGTCTCTGCAATCTGTATGGTCCTTAATATGGCAGAGCTCTGCTACCTGATCGGAAAGGCTCTCCTGAGGTGCCATAACCGCAACAAGAACCCCTACCACCCCAAACATGTTTCCAGAGAGAAGGAGTAtctgcagaataaaaaaaatgagatGCTGATGGAAACCTCAAGCCTGAAGGAGTTGGCCTCAGAAAAACAATCCTAA

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014520 True 519 mRNA 0.50 1 16308288 16308806

Neighbor

gene id symbol gene type direction distance location
AMCG00014521 LOC106575534,LOC106575594 coding downstream 815 16300633 ~ 16307473 (-)
AMCG00014515 pspc1,LOC108258933 coding downstream 57512 16231565 ~ 16250776 (-)
AMCG00014509 NA coding downstream 144168 16155258 ~ 16164120 (-)
AMCG00014510 NA coding downstream 240726 16041233 ~ 16067562 (-)
AMCG00014511 rdx,LOC108434698,LOC107757412,LOC107588847,LOC108258936 coding downstream 315132 15973353 ~ 15993156 (-)
AMCG00014519 NA coding upstream 7728 16316534 ~ 16346355 (-)
AMCG00014518 NA coding upstream 66614 16375420 ~ 16376973 (-)
AMCG00014528 xpo4,LOC106582068 coding upstream 72088 16380894 ~ 16409288 (-)
AMCG00014527 LOC104951642 coding upstream 102930 16411736 ~ 16420491 (-)
AMCG00014530 NA coding upstream 116589 16425395 ~ 16431657 (-)
G70679 NA non-coding downstream 26389 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 94161 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 604974 15700208 ~ 15703314 (-)
G70458 NA non-coding downstream 663374 15643619 ~ 15644914 (-)
G70420 NA non-coding downstream 783274 15522520 ~ 15525014 (-)
G70689 NA non-coding upstream 57318 16366124 ~ 16369464 (-)
G70731 NA non-coding upstream 156973 16465779 ~ 16469228 (-)
G70876 NA non-coding upstream 975513 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 1040630 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 1695004 18003810 ~ 18004023 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3174537 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 4640751 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5171202 11125029 ~ 11137086 (-)
G69537 NA other downstream 5510141 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 6247058 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 413267 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 1138062 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 1280461 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 1681845 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2892997 19201803 ~ 19203567 (-)

Expression


Co-expression Network