AMCG00014532


Basic Information

Item Value
gene id AMCG00014532
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16497287 ~ 16504076 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014532
ttttttttattattatttttttttacctttttaaaatgtgtgcaatgcaattattttgCAGGGTACTTGAACATTCCGGTTCTACCAGGAGCAGTTCTTAGAAGTGACTTCAAGACATACAGTCAGATAACTTGATGATGGGGAACTGTGCTGAAGAGGAGAAGCTGTGTCGCAAGCTGTCCAGAGTGTGCAGCAGGGGCCAGCTGAGAGACACCAAGCCCCCGGTCCCGCAGAAGCCCAACACCAGGGTATTCACCAGTGCAGCTCACGGCTCTGCCCTCCTACAGGGCTTGGAACATTTCCGCTCTGCTGAAACGCTGTGTGACGTGGCTCTGGTGCCAGGAGATGGAGATGAGTCGTTTGCAGTCCATAGGATAGTGATGGCCTCGTCCAGTGACTACTTTAAGGCAATGTTCACAGGTGGAATGAAAGAACAAGATTTGAAAACCATCAAGCTTCATGGGCTCAGCAGAGTGGGACTGAAGAACATCATAGACTTCATCTACACAGCTAAGGTGGCTCTGACCATGCACAACCTGCAGGATACCCTGGAGGCTGCCAGCTTCCTGCAGGTCATGCCAGTGCTGGACTTCTGTAAGGAGCTCCTGAGCAGTGAGGTGACTATAGAAAACTGTGTGGAAGTGGGCAGAATTGCTAGCGACTTCCATCTGGAGGAAGTAGAGACCTGCATCAACGAGTTTGTTCGAAATAACTTCTTGACTCTGGTGAAGTCGGGGAAGTACCTGCAGCTCTCTGAGCACAGCATGACCCATGCACTGTCCAGTGACAGCCTGAAGAACTTCTCTGAGATGGAGCTGTACCAAATCACCTGCTCCTGGGTCAAGCACCACCCCGACCGCAAGGTGCACACCTACAGTCTGATGAAGAACATCCGCTTCCCTCTCATGAGCCCAAATGAGCTGCTGCAGATCTCCCAGGAGGACTTGTCTCTGAGGGCTGACACGGCCTGCGTCAACCTCCTCTTGGAAGCCAGCAACTACCAGATGATGCCTTACATGCAGCCCATCATGCAGACGGAAAGGACACGCATCCGCTGTGACACCAACTATCTCGTCACCTTAGGGGGAGTAATGCGGCAACAGCTGGTGGTTAGCAAGGAACTGCGCTTGTATGATGAGGACACCCAGACCTGGAAAGCCCTGAAGCCCATGGACGTGCCAAGGTACCAACATGGCATTGCTGTAATTGGAAACTTCCTTTACATTGTGGGGGGCCAGAGCAACTATGATACTAAGGGCAAGACAGCAGTCGACAGTGTTTACCGGTATGACCCTCGCTTCAACAAGTGGCTGCAGGTTGCTTCCCTGAATGAAAAAAGGACCTTCTTCCACCTGAGTGCCTTGAAGGGAAAACTCTATGCTGTGGGAGGGAGGAACTCTACAGGCGAGATTGCCAGTGTGGAATGCTACGACCTCTGTAAAAACGAGTGGACATTTGTGTCTCCGATGGGAGAACCTCACTATGGCCATGCAGGAACTGTTTATGGGGATTTAATGTATGTCTCTGGGGGAATCACTCGAGACACCTTTCAGAAGGAGCTAACATGCTACGATCCTGACACGGACACCTGGAGCCGCAGAGCTGACATGTGTACCATCCGGGGGCTGCATTGCATGTGCTCCATTGAGGACCGCCTCTACGTCATCGGAGGGAACCACTTCCGAGGCACCAATGACTACGATGACGTGCTGAGCTCTGAGTACTATTGCCCAGGCACAGACCAGTGGACCGCCATCGCGCCCATGCTGCGGGGCCAGAGCGACGTAGGCGTGGCCGTTTTCAAGGGCAAGATCTATGTGATCGGGGGGTACTCCTGGAACAGCCGCTGCATGGTGGAGATAGTGCAGTGCTATGACCCTGAGGAGGACGaatggaaaaaagtgtttgatgTGCTGGAGCCTCTCGGTGGGATCCGGGCCTGCTCACTGACTGTACAGGCACCTGAAACCTCTGTGGAGACTCAGATCCAAGAGTGTCCGCTTTCGACCAAAACCTGAATTTGTGCCGTTGCCATAGCAATAGCACCAGTGGCGGACTAATGGTTCAAACTCCAAGATGGTCCAAAatcttattatcattatcattaccTTGAGATTATAAAGGTAATTTAtctcaggattttaggatttcAAAACCTGTTTTTCTCAAGATCATGCAATGATGGCTTGGAATAACGAGTTCCTTTGATGACTGATCTCATTAGTaacatattttcttattaaCGAGCCACTACAGAGACAAAACAGTCCTGTTACTTATGTGTGCATATCTGGTGCAATCATAATGCTCCTTGCCATAGACACAGTAATTATACAGGGACTATTGTCTAAGACTACTCCTGTCTTCCTGTGTCCCCACAAAAAGCAAGTTGTGATTTCTTTGTGGGATTTTATAATCCATTCTATagcaatattttcatttttctttcacattttagaatgaaaaatgtatgacaaATTCAGGATATTCTTGTCTGTGGTAACTACACATCAGCTAAATAGGTTTAGTTTATGatttttcactttaatatatatattttttaagtataaagagtgaatgtgtattgttttgcaaaaaaaaattacgctttttactttttgaatgTAGATTATATACGTATACATACTTTGTGAgacttttttccttttggaaAATTATGAACCTGCTGAGTAATATTTGAATGTTGGAGGCACTTCAATTTGAGGaattatgaaaataacacatttacaaaagacACCATGGATTATAAAAAGAATAGTGTATTCTCCAGATGCCTCTGTTGGTTATTTTGTCATATATAACACAGAATTaaacatattgttttgtattattatgtagaTTTAAGGATCTGGAAATGTTCAGGATAAACTGATTGAGAAGCAGTTTTAAGGATTCTTGGATTTCCACATTGTCTTGTGAGTCTTTGTCATTAAAGCACCACGTTAGTGGAAAAGTAAACAGCTGGAAGTAAGgtcaacaaaaatgtttatcaGAAGTAGCCTTGGTTTAACATGAAAAAACTTAGATAAGACAAGTGGTGTAACATTAAATCAGACCGCGTTACAAAATGTCAAGGTCTGTTCTCTGAAGGAAGCCAATTAGCATTGCATGGTCGATTCAAAGAAACAACTCAGTTCTAGAAAAACATATTAGTCAAGCAAAATATGTAGTGGTTGAAAGATGAATGTAACAGAGAGCACTGATGTATCATCTAAACATTTCACACATCCTTGGATCAGAAAAGTTACCTAAATACTTTACTAACATTTGAATTACCAACTAGAGCAACTACTCtgatttttaagttttgttttattggttgGACCTTATGTGTTTAAGGGTTCCTATTTAATCTTCAATTACCTATACCTCTTTAAATCAGTGGGTAGTATAGTCTCACTGTGGAGAATATCGTAGTCTCTTCTGTCACCATCTCAGTTAATCTGCTGGAATGTGCTTCAGGAGTTGTGTCCGTAATAGATGTTCTCAATACTCTCCTCCACTTTGGTCGTACTACCAGACTTGGTGGTTTTAAATTTGTAGGTTTATGTGCCCCTGCAGATAATgaacatacattaatacaaagttAGACAAATCAAAAGCATCCATTGCAAAACGTTATGTAAACATTCCCACAAAAATTCATGCCAAGGACAGAGGTGGGAAGATAGTGATAACTTTTGCAAGCCATTGCATTGCTGCAGTCCCTCACAGAATGAACTATTTAGAATGGTGCTTATTCACTATAACAAGCCACATGTGCCAccataacatattttacaattcatcagctatctgcatacatttcataaaataaataaagtgtaagGACAGAATGGTGTTCTTAGCACCTTAATTTCACTTCTGAACTGAAAgtcatattttctgtttatttccttttttaaatgttcacaatgTAATGACTAAGAAGATATATGAcctatttttttactttcattttgtgtgtgctttttaattGGACAACAAACTGGACacatatgttaaatatgtattttgtaaaaagtTTTTTCTGATGGTAATACAGTGGAAAATATCGTTCGACCCACTGGAATTTTTACAGTTCCAATTCCA

Function

GO: NA

KEGG:

id description
K10447 KLHL9_13; kelch-like protein 9/13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014532 True 4113 mRNA 0.42 7 16497287 16504076

Neighbor

gene id symbol gene type direction distance location
AMCG00014533 NA coding downstream 706 16479887 ~ 16496581 (-)
AMCG00014529 NA coding downstream 39919 16451881 ~ 16457368 (-)
AMCG00014526 NA coding downstream 50319 16439295 ~ 16446968 (-)
AMCG00014530 NA coding downstream 65630 16425395 ~ 16431657 (-)
AMCG00014527 LOC104951642 coding downstream 76796 16411736 ~ 16420491 (-)
AMCG00014534 hao2,LOC102793069 coding upstream 3311 16507387 ~ 16512051 (-)
AMCG00014540 fam46c,LOC107658236,LOC107597368,LOC107724489,LOC107668849,LOC107569365 coding upstream 279001 16783077 ~ 16785522 (-)
AMCG00014541 man1a2,LOC107668846,LOC107658234,LOC107724469,LOC107597367,LOC106582087 coding upstream 295965 16800041 ~ 16814919 (-)
AMCG00014544 man1a2,LOC107658234,LOC107712247,LOC107724469,LOC107668846 coding upstream 322569 16826645 ~ 16955741 (-)
AMCG00014542 NA coding upstream 462716 16966792 ~ 16973783 (-)
G70731 NA non-coding downstream 28059 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 127823 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 215388 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 283160 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 793973 15700208 ~ 15703314 (-)
G70876 NA non-coding upstream 780243 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 845360 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 1499734 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 1825121 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 2160188 18664264 ~ 18664631 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3363536 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 4829750 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5360201 11125029 ~ 11137086 (-)
G69537 NA other downstream 5699140 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 6436057 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 217997 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 942792 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 1085191 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 1486575 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2697727 19201803 ~ 19203567 (-)

Expression


Co-expression Network