AMCG00014540 (fam46c,LOC107658236,LOC107597368,LOC107724489,LOC107668849,LOC107569365)


Basic Information

Item Value
gene id AMCG00014540
gene name fam46c,LOC107658236,LOC107597368,LOC107724489,LOC107668849,LOC107569365
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16783077 ~ 16785522 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014540
aataaacgcAAATAAACAAAGTGCCGGCTGTGGAGGAGTATAGGGCCGCGGCGTGGCCACAGGCGGTGGTTTGGCGTATAAGAGTGAGTCCGGCCGGCAGCctctcacagcacagcagaCCCATTGCTTGCTGTTAACGGGTGGATGCAAGTGTTTGTGCGccgttattttattttatcttctgTGTCATTTGCATGCGATCAAAGGACTCTATCTGgaatAAGAAACCCAACATGGCAGAAGTTGAGAGCAATGAATGCAAGTCCAGCAGCGTGCTGAGCTGGGATCAGGTGAACCGTTTAAATGAAGTCCTCACCGAAGCCGTCCCAGTCCACGGCCGGGGCAACTTCCCAACCCTAGAGGTAAAACTGAAGGACATTGTGCAGATGGTGCGAAACCGCCTGCAGGAGAGAGGAATCAAAGTGAAAGATGTCCGTTTAAATGGATCCACTGCCAGTCACGTGTTGGTTCAGGACAATGGCTGGAGTTACAAAGACCTGGATGTCATTTTTAGAGTGGATCTTCCCAATGAAGCTCAATTCCAGCTCATCAAAGAAGTTGTTTTGGGCACACTCTTGGATTTCCTGCCTGAAGGGCACTTCCACCCTACTGTCATCGGGGAGAGCGTCTATGGGGACTTTGACGTTGCACTGGACCATCTGAAGAACAAAATGATAGCCACCAAGAACCCAGAGGAAATCCGAGGGGGCGGACTGCTGAAGTACTGCAACTTGCTCGTTCGCGACTTCAAGCCCACCGACGAAGAGCGGTTCAAGGCCTTGGAACGGTACATGTGCTCACGGTTTTTCATTGACTTTCCAGACATTGTGGAACAGCAAAGGAAGCTGGAATCCTACCTCCAGAGCCATTTTATTGGCGAGGAGAAAAGCAAGTACGACTATCTCATGATTTTGCGCAGGGTTGTGAACGAGAGTACGGTCTGCCTGATGGGACATGAGAGGAGGCAGACGCTGAACCTAATTTCCCTCATTGCTTTTAGAGTACTTGCGGAGCAAAACGCCATACCGGATGCATCTAGTGTCACCTGTTACTACCAGCCTGCACCCTATGTCAGAGACCTCAATTTCAGCAACTACTATGTAGCTTCATGTAACCAGTCTTATCCAACTTGGCTCCCA

Function

symbol description
fam46c terminal nucleotidyltransferase 5C

NR:

description
PREDICTED: protein FAM46C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014540 True 1139 mRNA 0.50 3 16783077 16785522

Neighbor

gene id symbol gene type direction distance location
AMCG00014534 hao2,LOC102793069 coding downstream 271026 16507387 ~ 16512051 (-)
AMCG00014532 NA coding downstream 279001 16497287 ~ 16504076 (-)
AMCG00014533 NA coding downstream 286496 16479887 ~ 16496581 (-)
AMCG00014529 NA coding downstream 325709 16451881 ~ 16457368 (-)
AMCG00014526 NA coding downstream 336109 16439295 ~ 16446968 (-)
AMCG00014541 man1a2,LOC107668846,LOC107658234,LOC107724469,LOC107597367,LOC106582087 coding upstream 14519 16800041 ~ 16814919 (-)
AMCG00014544 man1a2,LOC107658234,LOC107712247,LOC107724469,LOC107668846 coding upstream 41123 16826645 ~ 16955741 (-)
AMCG00014542 NA coding upstream 181270 16966792 ~ 16973783 (-)
AMCG00014543 NA coding upstream 190888 16976410 ~ 16977779 (-)
AMCG00014545 NA coding upstream 205647 16991169 ~ 17002661 (-)
G70731 NA non-coding downstream 313849 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 413613 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 501178 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 568950 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 1079763 15700208 ~ 15703314 (-)
G70876 NA non-coding upstream 498797 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 563914 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 1218288 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 1543675 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 1878742 18664264 ~ 18664631 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 45200 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3649326 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 5115540 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5645991 11125029 ~ 11137086 (-)
G69537 NA other downstream 5984930 10796716 ~ 10798147 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 661346 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 803745 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 1205129 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2416281 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 2432200 19217722 ~ 19225230 (-)

Expression


Co-expression Network