AMCG00014543


Basic Information

Item Value
gene id AMCG00014543
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16976410 ~ 16977779 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014543
CATGATTGCTCTCATAATCATAGTGGCTGGACTTATTATTTTCATCCTGGCCATAGCATTTTCAGGCTCCAAGACAATATTGGTGGAAACCCCAAACAAATATCCTGTTGGGAATATTGGCAATGATGTAATATTGGATTGTAAATTTAATCCACTGAATTCAAAAGGCAAAGAGGTCACTCAAATTGCAATAGATTGGGTAAAGGAAGGCCTTAATGGTGTTGTTTATAAATATGACAATGGGGTAAGCCAGCTGCAAACCCAAAACCCAGACTTCAAAGACAGAGCCCAACTGTTCCCAAATGCCATCTCCAGTGGCAACGTGTCTCTGCTGCTGCGGAGTGTACAGCTGAAGGACCAGGGCACTTACACGTGTTCGGTGAGAACCTCCAGTGGGAAGGGAGACATCAGCGTACACCTCAAGATGGCCGGTAGGGATTCTATAACCCTAAAGGGTGTGGCTAAGACGTGGTACCCCAAGCCAGCGGTGACCTGGGAGAACTATGATGGAACAGTATTGAACGGCAGCACAAGCTATACTAACAACTCGGCAGGAATATTTACCCTGGCGTTAATATTAACCAAAGTGAATTCTGATGACACATACCAGTGCATAATACAGAACAACTTGGTGACCTCTGTGTCTCATGTGACAGTA

Function

GO: NA

KEGG:

id description
K06747 B7H4, VTCN1; immune costimulatory protein B7-H4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014543 True 658 mRNA 0.45 3 16976410 16977779

Neighbor

gene id symbol gene type direction distance location
AMCG00014542 NA coding downstream 2627 16966792 ~ 16973783 (-)
AMCG00014544 man1a2,LOC107658234,LOC107712247,LOC107724469,LOC107668846 coding downstream 20669 16826645 ~ 16955741 (-)
AMCG00014541 man1a2,LOC107668846,LOC107658234,LOC107724469,LOC107597367,LOC106582087 coding downstream 161491 16800041 ~ 16814919 (-)
AMCG00014540 fam46c,LOC107658236,LOC107597368,LOC107724489,LOC107668849,LOC107569365 coding downstream 190888 16783077 ~ 16785522 (-)
AMCG00014534 hao2,LOC102793069 coding downstream 464359 16507387 ~ 16512051 (-)
AMCG00014545 NA coding upstream 13390 16991169 ~ 17002661 (-)
AMCG00014546 NA coding upstream 54751 17032530 ~ 17035481 (-)
AMCG00014547 NA coding upstream 87890 17065669 ~ 17086786 (-)
AMCG00014548 LOC105904639 coding upstream 142425 17120204 ~ 17126776 (-)
AMCG00014550 NA coding upstream 193051 17170830 ~ 17241074 (-)
G70731 NA non-coding downstream 507182 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 606946 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 694511 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 762283 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 1273096 15700208 ~ 15703314 (-)
G70876 NA non-coding upstream 306540 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 371657 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 1026031 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 1351418 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 1686485 18664264 ~ 18664631 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 238533 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3842659 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 5308873 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5839324 11125029 ~ 11137086 (-)
G69537 NA other downstream 6178263 10796716 ~ 10798147 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 469089 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 611488 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 1012872 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2224024 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 2239943 19217722 ~ 19225230 (-)

Expression


Co-expression Network