AMCG00014546


Basic Information

Item Value
gene id AMCG00014546
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17032530 ~ 17035481 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014546
ATGGAGGACAGTCGTGTTCGTCTGAACTGCTCCATCACAGCCCAGACAAGCCCAGACTCCCAGTACACCGTGCTGTGGTATGCCAAGAAGACCGGCGAACCGGACGCAGAGCTCCTGCTCAAAATCAACCACAACTCGGCCTTCGAGTACGGGACGTACGCCGAGGAGGAGCGCCTAAAGAGCCGGGTGCAGTCCGAGCGTCTTTCCCCTCAGCTGTTCAGCCTCACGCTGCACCAGGCCGAGCTGAGCGACACTGGTACCTACTACTGCCTCGTTCAGGAGTGGCTGCTTGACCCCAACAACATCTGGTACCAGCTGGCCGAGGAATCTTCTGGGTTCACTGATGTGCTTGTTAAGCTGCCAgAAATTAGGCTGCAGGTGGAGGAATCTGATTCAAACATGACCATTGAAGAACAAGAATCCTTCAGACTCGGTTGCAGCATTCCCTCGCAATCCAGCAAAGACTCGCGCTTCTCCGTCTCGTGGTATGTTCTCCGCGTCAAAGACAGCGggagggaggagcccgagtgtATCTTCTCCATTGGTCACGACGCCGTCTTCGGGAATGGAAACTGCAGCCCCTCTGAGGCCGCGGGCCCCAGCTCCAGACTGCAGTTCGAGAGACCCACCTCAGAGTTGTACAGTCTGACGATACAGAAGGCCAGCCAAAGCGATGCAGGAAACTACTACTGTCATGTGGAGGAGTGGCTGCTCAACCCCAGGAACGCCTGGTACCGCCTAACCACAAACAACTCTGGAGTGACTGTGGTCAATGTGCTCGGACAAGGTTCATCTCTACAGTCGGTGATTTGTTCCAATGACTCCCTGTTCTACTTTGTCTTCTTCTACCCCTTCCCCATTTTCGGGATCCTCCTCATCACCATTCTTTTGGTGCGTTACAAGGCCCGCAACTCCAGCAAAAACTCGGAAGGCAAAAACGGAGCTCCTCTTCTGTGGATCAAGGAGCCCCACATCAATTACTCGCCCACCTGCCTGGACCCTCCCGCTCTCAGCCTCCACCCAGGGTCCGTCGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014546 True 1038 mRNA 0.56 3 17032530 17035481

Neighbor

gene id symbol gene type direction distance location
AMCG00014545 NA coding downstream 29869 16991169 ~ 17002661 (-)
AMCG00014543 NA coding downstream 54751 16976410 ~ 16977779 (-)
AMCG00014542 NA coding downstream 58747 16966792 ~ 16973783 (-)
AMCG00014544 man1a2,LOC107658234,LOC107712247,LOC107724469,LOC107668846 coding downstream 76789 16826645 ~ 16955741 (-)
AMCG00014541 man1a2,LOC107668846,LOC107658234,LOC107724469,LOC107597367,LOC106582087 coding downstream 217611 16800041 ~ 16814919 (-)
AMCG00014547 NA coding upstream 30188 17065669 ~ 17086786 (-)
AMCG00014548 LOC105904639 coding upstream 84723 17120204 ~ 17126776 (-)
AMCG00014550 NA coding upstream 135349 17170830 ~ 17241074 (-)
AMCG00014549 NA coding upstream 214809 17250290 ~ 17279447 (-)
AMCG00014551 NA coding upstream 278705 17314186 ~ 17323621 (-)
G70731 NA non-coding downstream 563302 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 663066 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 750631 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 818403 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 1329216 15700208 ~ 15703314 (-)
G70876 NA non-coding upstream 248838 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 313955 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 968329 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 1293716 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 1628783 18664264 ~ 18664631 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 294653 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3898779 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 5364993 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5895444 11125029 ~ 11137086 (-)
G69537 NA other downstream 6234383 10796716 ~ 10798147 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 411387 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 553786 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 955170 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2166322 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 2182241 19217722 ~ 19225230 (-)

Expression


Co-expression Network