AMCG00014552


Basic Information

Item Value
gene id AMCG00014552
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17328913 ~ 17332815 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014552
GTCAAAATGTTATCTATGGATTATTAAACGCAGAAATAACTTTGAAACCAATCAGCAGTGGATTTTTAGAAGAAATTATCTGGAAACATAATATGGATAAGGTTGCAGAGTATGACCAAGATCaacagattttgtattttgcgGAATACAACGGAAGGACAACCCTGGACATAAAAAACGGATATCTTACAATCAAGGCTCTCACAAAGAAAGACAGCGGAAAATACAGCATAAATGTGCAGATAAGTGGCAAGTTACAAACCCTGCAGTCGTATAACTTAATAATCCTTGAGCATGTCCCAAAACCAACAGTCACTTGTAAGGCTGATGATCTTAATGCAACTCTGCGCTGTCTTGCCCAAACAAGCTATAATACTCAGTACAGATGGGAAGGACCACAAAACCAAGAGCTTTCTGGATCAGAGTTGCCGATCAAGAGAGAGGGGAGCCAGCACTCAGAGTACACGTGTATTGTCAGTAATCCTGTGAGTGAGAGCAGGAGTGAAGTTTTTCATGCTGAACACTGCTTCCCCTCA

Function

GO: NA

KEGG:

id description
K06492 CD58, LFA3; CD58 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014552 True 536 mRNA 0.41 2 17328913 17332815

Neighbor

gene id symbol gene type direction distance location
AMCG00014536 gdap2,LOC104943794,LOC104954255 coding upstream 563361 16737483 ~ 16765552 (+)
AMCG00014538 NA coding upstream 597044 16722198 ~ 16731869 (+)
AMCG00014537 NA coding upstream 609176 16692012 ~ 16719737 (+)
AMCG00014535 tbx15,LOC107712261,LOC107724509 coding upstream 717252 16583824 ~ 16611661 (+)
AMCG00014531 wars2,LOC106531917 coding upstream 750756 16557564 ~ 16578157 (+)
AMCG00014560 NA coding downstream 446750 17779565 ~ 17780081 (+)
AMCG00014565 NA coding downstream 616745 17949560 ~ 18029896 (+)
AMCG00014564 NA coding downstream 705293 18038108 ~ 18067182 (+)
AMCG00014563 klf5,LOC107757638,LOC102777034 coding downstream 737719 18070534 ~ 18080340 (+)
AMCG00014569 NA coding downstream 991455 18324270 ~ 18332414 (+)
G70883 NA non-coding upstream 11357 17316253 ~ 17317556 (+)
G70865 NA non-coding upstream 75242 17250319 ~ 17253671 (+)
G70846 NA non-coding upstream 155851 17132063 ~ 17173062 (+)
G70835 NA non-coding upstream 230949 17028960 ~ 17097964 (+)
G70776 NA non-coding upstream 595276 16730878 ~ 16733637 (+)
G70897 NA non-coding downstream 16621 17349436 ~ 17350952 (+)
G70908 NA non-coding downstream 157011 17489826 ~ 17490607 (+)
G70938 LOC107575789,LOC100846954 non-coding downstream 317956 17650771 ~ 17651002 (+)
G71036 kctd12 non-coding downstream 1132404 18465219 ~ 18468335 (+)
G71038 NA non-coding downstream 1144228 18477043 ~ 18478028 (+)
AMCG00014525 NA other upstream 859704 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 1189881 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 1643014 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 2086580 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 2972045 14302447 ~ 14356868 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 31983 17364798 ~ 17487050 (+)
G71004 NA other downstream 939039 18271854 ~ 18274360 (+)
G71525 NA other downstream 5522527 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 9572062 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 10502688 27835503 ~ 27841871 (+)

Expression


Co-expression Network