AMCG00014566


Basic Information

Item Value
gene id AMCG00014566
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18029841 ~ 18037569 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014566
ATGCTGAAATCTAAAACTTTCGTAAAGAAAACCCGGTCAGGCCGGGTGATGAAGATAGTTCGTGAACACTACCTGCGAGATGATATCTGGTGTGGGAGTGCAGTTTGCGAGATATGTAAGCAGGAATCCACGGTGTTGCAGCGGGATTCCTGTATGGAGAGCAGCCTGTGTTCGTCTGCCCACTATATTATTCCAGATACAAATGTGGTTTTACACCAGATTGACATCCTTGAGGATCCACTGATCAGGAATGCGATCATCCTCCAGACTGTTTTGCAAGAGGTCAGACACAGAAGTCCCACTGTTTACAAGAGGATCAAAGACGTCATCCATAATGTGGACAAGCATTTCTACACTTTTACTAATGAACACCACAGggAAACCTATATAGAACAAGAACAAGGGGAAAGTGCCAATGACCGAAATGACAGAGCTATCCGGGTGGCAGCAAAGTGGTACAGTGAACACCTGAAAAACGCAGAGAAAGCCAAGGACTTGCAAGTCATTTTGCTGACAAATGACAGAGCGAACAAGGAGAAAGCTGTCGAAATTGGCCTGATGTCATTCAAATGTGAAGAGTACATAAAGAGTCTGATTGCAAACCCTGAACTTGTGGATCATCTTGCTTTAACATCAGATGATACTAATGAAGTTGAAAGCAGTAAACTCATCTTCCCAGAGCatctcccactgtccaaagtgCAGGCTGGCATTAAGTCTGGTACTTTCCTGCAAGGGACATTCAGAGCCAACCGAGACAATTACCTGGAGGCCACTGTGTTCATCCATGTGGATGGGGAAGAAGCTTCAGAGGTTCTCATCCAGGGCCTGGTCAATCTGAACAGGGCAGTGCACCAGGACGTGGTGGCAGTGGAGTTACTGCCCAGGGACCAGTGGGTGGCCCCCTCTTCTGTTGTCCTGCTAGATGAAGCCCCGAAAGAAGATGAAAAtgaggaagagaaggaaaatcTGctGAAGAACAAAGCAAATGCAAGTAATCTGAAGCCCACGGGGAGAGTTGTGGGCATCATAAAGAGGAACTGGAGGCCTTTCTGTGGGATGCTCTCTAAATCACAAATCAAAGAgGCTACAAGACACTTATTCACTCCAGCTGACCGCAGGATCCCCAGAATCCGCATAGAAACTCGCCAGGCTTCTGCATTAGAAGGACAGAGGATTATTGTTGCGATTGATGGCTGGCCCAAACATTCTAGATATCCCAACGTAAGATCATTTAAGACTATACGTTTACAGCTTCAAACAGCTGACTTCACAGAGGCAACGCTATGTAACGAGGAGGATTCTTCTGGGGGTCATTTTGTAAGGAGCCTGGGAAACGCTGGAGACAAAGAGACCGAGACAGaagtgctgctgctggagcaTGATGTTCCTCACCAGGCTTTCTCTCAAGCTGTCCTCAGTTTCCTTCCCACAATGCCTTGGCACATTACAGAGGAGGATTTGAAAAAGCGTGAAGATCTGAGGCCCATTCACGTGTGCAGTGTGGATCCCCCTGGGTGTACCGATATCGATGATGCTCTTCACTGCCTCGATTTGGAGAATGGCAATCTCGAGGTTGGAGTTCATATTGCAGATGTCAGTCACTTCATTCGACCTGGAAATGCTATGGACCTGGAATCGGCAAACAGAGGAACCacagtgtatctgtgtgaaAAGAGAATTGACATGGTTCCCGAACTACTGAGCTCCAATCTGTGTTCTCTGCGGTCAAATGTAGAAAGGTTTGCATTTTCTTGTATCTGGGAAATTAATCACGAAGCTGAAATAATCAGCACACGGTTTACTAAAAGTGTTATAAACTCCAAGGCTTCCCTAACATACGCCGAAGCCCAGATGAGAATAGATGACCTCAGCATGAATGATGAGATCACCAAGAGCTTACGTGGTTTAAACGCATTAGCCAAGATACTTAAAAAGAGAAGAATCGAAAAAGGggAAACTAACTCTATGGTAGAGGAATTCATGTTATTGGCAAATATATCAGTTGCAAAGAAGATCTATGAAGAATTTCCCGAGTGTGCCATGCTCAGAAAAcatcctgcccccccaccttcAAACTATGACATTCTGTTTAAAGCTGCAAAATCTAAGAACCTTGCTCTGCGGACAGACTCGGCCAAAGCTCTTGCAGACTCTCTGGACGCGGCCCATGTGGAGGGATTCCAGTACTTCAACACGCTGCTGAGAATCCTGGCCACTCGCTGCATGATGCAGGCCGTGTACTTCTGCTCGGGCATGGACAGTGACTTCCATCACTATGGCCTGGCTTCACCCATCTACACTCACTTCACCTCGCCAATCAGGAGGTACGCTGATATTATAGTGCATCGGTTGCTGGCAGTAGCTATAGGTGCGGACTCTACCTATCCAGACCTGATGGACAAACTCAAGCAGGCTGCTCTGAGTAACAATCTGAACTACCGACACAAGATGGCTCAGTATGCACAGAGGGCATCAGTTGCCTTCCACACTCAGttattttttaaaagcagagggatCCTTAACGAAGAGGGCTTCATTCTGTTTGTGAAGAAGAACGCCATTGTCATTCTAATACCGAAATTTGGACTAGAAGGCACAGTGTTCtttgaaaacaaagacaaaccaAACCCTCGCTTGACGTTTAATGAGGAGGAACCTGCATTGACCGTGGAAGATTATACTTTCCATATGTTTGACAAAGTGAAAGTTACCATCAGCTTAGACTCATCAAATATCCAGCATCAGAAGATCAGAATGTCCCTCGTGGAGCCAGTGATCCCAGGGGTTAGTGTATCTCCATCCAGTGAACCTGAAGCGAAGAAAGCCAAGCTGGACCGCTGA

Function

GO: NA

KEGG:

id description
K12585 DIS3, RRP44; exosome complex exonuclease DIS3/RRP44

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014566 True 2844 mRNA 0.46 20 18029841 18037569

Neighbor

gene id symbol gene type direction distance location
AMCG00014562 dach1,LOC105030421,LOC106586049 coding downstream 94127 17935166 ~ 17935714 (-)
AMCG00014561 dach1,LOC107668899,LOC108426032 coding downstream 221411 17754964 ~ 17808430 (-)
AMCG00014558 NA coding downstream 447767 17572903 ~ 17582074 (-)
AMCG00014557 NA coding downstream 463195 17555667 ~ 17566646 (-)
AMCG00014556 LOC107569141 coding downstream 528885 17484850 ~ 17500956 (-)
AMCG00014568 LOC104962236,LOC106536821 coding upstream 77442 18115011 ~ 18179286 (-)
AMCG00014571 NA coding upstream 226386 18263955 ~ 18291505 (-)
AMCG00014572 LOC107655530,LOC107720111,LOC107668890 coding upstream 279285 18316854 ~ 18317264 (-)
AMCG00014570 NA coding upstream 280516 18318085 ~ 18323699 (-)
AMCG00014578 kctd12 coding upstream 429841 18467410 ~ 18468282 (-)
G70954 NA non-coding downstream 25818 18003810 ~ 18004023 (-)
G70898 NA non-coding downstream 678869 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 745265 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 1560613 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 1660377 16366124 ~ 16369464 (-)
G71016 NA non-coding upstream 291628 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 626695 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 631232 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 648929 18686498 ~ 18687346 (-)
G71174 NA non-coding upstream 813155 18850724 ~ 18851111 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 7746 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 408690 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 567551 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1291964 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 4896090 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 1164234 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 1180153 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 4188355 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 9247851 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 9298126 27335695 ~ 27369527 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000049_01430548_01446088 DIS3 coding CI01000049 null 1429996 ~ 1446192 (-)