AMCG00014577 (zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427)


Basic Information

Item Value
gene id AMCG00014577
gene name zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18475543 ~ 18477922 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014577
GAAGGCGGACATGGCGAAGCGGGTGGCGGTGGTGCTGGCCGGCTGTGGGGTGTTTGACGGCAGTGAGATCCATGAGGCCTCGGCGGCGCTGGTGCATCTGAGCCGGGGCGGCGCGACTGTTAAAATGTTTGCTCCTAATATTGACCAGATGCATGTAGTTGACCATGTGAAGGGCAGCCCAACAGAGGAGAAGAGAAACGTTCTGGTAGAAAGTGCCCGCCTGGCACGAGGGAATATTCAGGACCTCGCTGAGCTGGACGTCAGTGAACAGGATGCTGTTATTTTTCCGGGTGGATTTGGAGTTGCTAAAAACCTCTGCACCTGGGCTGTGAGTGGAAAGGACTGCACGGTGAACGACCAGGTGAAGTCCACCCTGCAGGCTTTCCACAGCGCCAAGAAGCCAATTGGACTGTGCTGCATTTCCCCAGTGCTGGCTGCCAAAGTGTTCCCGGGCTGCGAAGTGACCGTGGGACACAATAACAATGATGACGGCAGGTTTCCAGGTGCTGACACAGCCGGGGCGATCGAGCAACTGGGCTGCAAGCACGTCTGCAAAAACGTCGACGAAGCCCACGTGGACGAGAAGAATAAAATCGTGACGACGTGCGCGTTCATGTGTGAAGCCCCTCTTCATGAGATCTTCGACGGTGTTGGTGTAATGGTACAGGAGGTGCTGAAACTCGCTTGAATTTCTCTGCGGCCACGGAGTCATAAATGCAGTGACCTTTGTTGGGAAGCGTATGGAATATAACACTCCGACCTGGGAAACGAAATCCTAATAAAACTGCTAAAGCAATGGGGTTTTCTTTTACTGAAAATTAAAGATTCTGTATAGTTTTCTGTAGTGGTACACTATTGCATTGAAAATCAGAATGAATCCCTGTTATTGCACAAACACTAGCCAATAAATATGCTTACTCTAACAGAATCATTTGTGGTCATTGAAAATAACTATATTAATACTGAAAGCTGTATCACGGTTTTCAGCTTGTGGCAGTTTCCATGTCAGTGGTGAGTTCAGAGCACGCATGAACAGTCGTTAGTTGTGGCTATCCCGTCTCTTAATTAGAGGGCAGAGATG

Function

NR:

description
PREDICTED: ES1 protein homolog, mitochondrial-like

GO:

id name namespace
GO:0005739 mitochondrion cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014577 True 1081 mRNA 0.50 4 18475543 18477922

Neighbor

gene id symbol gene type direction distance location
AMCG00014578 kctd12 coding downstream 7261 18467410 ~ 18468282 (-)
AMCG00014570 NA coding downstream 151844 18318085 ~ 18323699 (-)
AMCG00014572 LOC107655530,LOC107720111,LOC107668890 coding downstream 158279 18316854 ~ 18317264 (-)
AMCG00014571 NA coding downstream 184038 18263955 ~ 18291505 (-)
AMCG00014568 LOC104962236,LOC106536821 coding downstream 296257 18115011 ~ 18179286 (-)
AMCG00014576 fbxl3,fbxl3a,LOC107703114 coding upstream 7339 18485261 ~ 18487280 (-)
AMCG00014579 mycbp2 coding upstream 11628 18489550 ~ 18557288 (-)
AMCG00014585 NA coding upstream 161890 18639812 ~ 18644670 (-)
AMCG00014588 vwa8 coding upstream 218153 18696075 ~ 18709409 (-)
AMCG00014589 vwa8,LOC107579031 coding upstream 242883 18720805 ~ 18766660 (-)
G71016 NA non-coding downstream 144443 18329197 ~ 18331100 (-)
G70954 NA non-coding downstream 471520 18003810 ~ 18004023 (-)
G70898 NA non-coding downstream 1124571 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 1190967 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 2006315 16465779 ~ 16469228 (-)
G71133 NA non-coding upstream 186342 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 190879 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 208576 18686498 ~ 18687346 (-)
G71174 NA non-coding upstream 372802 18850724 ~ 18851111 (-)
G71179 NA non-coding upstream 396683 18874605 ~ 18878253 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 453448 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 854392 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 1013253 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1737666 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5341792 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 723881 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 739800 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3748002 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8807498 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 8857773 27335695 ~ 27369527 (-)

Expression


Co-expression Network