AMCG00014584


Basic Information

Item Value
gene id AMCG00014584
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18662208 ~ 18667126 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014584
GTTCCATCCCCAAAACCAAGCCGGTGTCTCATACCCCTCAGCAATGgctaataatgaaaacaaaaatgtctactCTCCTCCTGCAGTTTACCACAGAAGGAGTAACACGAAAGAGCTGCATCCCGAGTATGACTGTCTGCAAACGAGGATCTTTAAAATCATTGTCATAGGCGACTCCAATGTCGGAAAGACCTGCCTGAGTTACAGATTTTGCGGAGGGAAATTTCTTAAAAACCCAGAAGCAACAATAGGGGTGGATTTCAGAGAGCGGACCGTAGAGATCGATGGAGAAAACATCAAGttaCAAATCTGGGACACAGCAGGTCAAGAGCGATTCCGGAAAAGCATGGTGGAGCACTACTACAGGAACGTGAAAGCAATCATCTTCGTCTATGACATCACTAAGCTATCCACCTTTGAGAACCTGCCAGAATGGATCGAGGAGTGCGGCAGACATTCCGTGTCCCCGTCCGTGCCTCAAATATTAGTTGGCAATAAGTGCGATCTGAGGGACAGGTGTCAGGTCTCTACTTCACTGGCCCAGAGACTTGCGGACAGTTACAACTTCCCCCTGTTTGAGACTTCGGCAAAGGACCCCAAAGAGAAGGAGCACGTGGACGCCATTTTTATGACCCTTGCATACAAGCTGAAAAACCACAAACCTTTAAGACTGAAGCAGCCCATTGAATGTAGCATGCTCCAGCTCCCAGAGAGACAGGATGAACCAAATCCATTACCCTGTGCTCAGTCCCTGAGCCCCATGTTGCTGGCTTCCATGTCCAAGATGAAAGGGCTGCTGGGGGTCAGGGTGGGCCAGGACAAGGGCCTGAGCCAGGGCATCACAAAGCTGGGAGAAGACAAC

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0015031 protein transport biological_process
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014584 True 862 mRNA 0.49 3 18662208 18667126

Neighbor

gene id symbol gene type direction distance location
AMCG00014581 NA coding upstream 3147 18645860 ~ 18659061 (+)
AMCG00014586 NA coding upstream 23604 18636706 ~ 18638604 (+)
AMCG00014582 wbp4 coding upstream 29518 18626559 ~ 18632690 (+)
AMCG00014580 NA coding upstream 37619 18610560 ~ 18624589 (+)
AMCG00014583 NA coding upstream 52764 18586434 ~ 18609444 (+)
AMCG00014587 NA coding downstream 1680 18668806 ~ 18674332 (+)
AMCG00014592 NA coding downstream 114931 18782057 ~ 18786527 (+)
AMCG00014591 dgkh coding downstream 136280 18803406 ~ 18845971 (+)
AMCG00014596 akap11 coding downstream 186182 18853308 ~ 18878273 (+)
AMCG00014594 NA coding downstream 222646 18889772 ~ 18900200 (+)
G71038 NA non-coding upstream 184180 18477043 ~ 18478028 (+)
G71036 kctd12 non-coding upstream 193873 18465219 ~ 18468335 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 1011206 17650771 ~ 17651002 (+)
G70908 NA non-coding upstream 1171601 17489826 ~ 17490607 (+)
G70897 NA non-coding upstream 1311256 17349436 ~ 17350952 (+)
G71136 NA non-coding downstream 21422 18688548 ~ 18692633 (+)
G71183 NA non-coding downstream 234099 18901225 ~ 18902161 (+)
G71237 NA non-coding downstream 380832 19047958 ~ 19048172 (+)
G71283 tpt1,LOC106582181 non-coding downstream 551191 19218317 ~ 19222919 (+)
G71362 NA non-coding downstream 1257776 19924902 ~ 19925198 (+)
G71004 NA other upstream 387848 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1175158 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2192999 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2523176 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 2976309 15675631 ~ 15685899 (+)
G71525 NA other downstream 4188216 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 8237751 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 9168377 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 9201577 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9635247 28302373 ~ 28304073 (+)

Expression


Co-expression Network