AMCG00014592


Basic Information

Item Value
gene id AMCG00014592
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18782057 ~ 18786527 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014592
ATGGGAAACGCGAAACAAGGTTACACATTATTTGGACAAGGTGATATGAACAGGTTAGAGATTTCCTCCAGTGCTGGATGCGGTGGCACAGACAGCAGCGGCCGGCTGTGCGGGGactgcagacacacaccagCCCGCATCCGAGAGCCCCTCTGCGGAGAGTCCGAGAAGGGAGCGTCGAGCGCCGCGGGGATTGTGAGCTCGGGGATGCAGCATCATGTCATCGGGGCTGCGGGGGGACCTGGACCGGTAGACGAGTCCTCGGATAGCGAAGGAGAGCAAGAAGGCCCCCAGAAACTCATCAGGAAAGTGTCCACCTCCGGCCAGATTAGGAGTAAGGGAGGAAGTGTGGTCTACATTTCTAGTGGTTTCAGATAG

Function

GO:

id name namespace
GO:0015467 G-protein activated inward rectifier potassium channel activity molecular_function
GO:0099094 ligand-gated cation channel activity molecular_function
GO:0022834 ligand-gated channel activity molecular_function
GO:0022839 ion gated channel activity molecular_function
GO:0022843 voltage-gated cation channel activity molecular_function
GO:0015276 ligand-gated ion channel activity molecular_function
GO:0005242 inward rectifier potassium channel activity molecular_function
GO:0005244 voltage-gated ion channel activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014592 True 378 mRNA 0.58 4 18782057 18786527

Neighbor

gene id symbol gene type direction distance location
AMCG00014587 NA coding upstream 107725 18668806 ~ 18674332 (+)
AMCG00014584 NA coding upstream 114931 18662208 ~ 18667126 (+)
AMCG00014581 NA coding upstream 122996 18645860 ~ 18659061 (+)
AMCG00014586 NA coding upstream 143453 18636706 ~ 18638604 (+)
AMCG00014582 wbp4 coding upstream 149367 18626559 ~ 18632690 (+)
AMCG00014591 dgkh coding downstream 16879 18803406 ~ 18845971 (+)
AMCG00014596 akap11 coding downstream 66781 18853308 ~ 18878273 (+)
AMCG00014594 NA coding downstream 103245 18889772 ~ 18900200 (+)
AMCG00014595 dnajc15 coding downstream 162786 18949313 ~ 18963043 (+)
AMCG00014598 NA coding downstream 259156 19045683 ~ 19047641 (+)
G71136 NA non-coding upstream 89424 18688548 ~ 18692633 (+)
G71038 NA non-coding upstream 304029 18477043 ~ 18478028 (+)
G71036 kctd12 non-coding upstream 313722 18465219 ~ 18468335 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 1131055 17650771 ~ 17651002 (+)
G70908 NA non-coding upstream 1291450 17489826 ~ 17490607 (+)
G71183 NA non-coding downstream 114698 18901225 ~ 18902161 (+)
G71237 NA non-coding downstream 261431 19047958 ~ 19048172 (+)
G71283 tpt1,LOC106582181 non-coding downstream 431790 19218317 ~ 19222919 (+)
G71362 NA non-coding downstream 1138375 19924902 ~ 19925198 (+)
G71378 NA non-coding downstream 1400087 20186614 ~ 20186966 (+)
G71004 NA other upstream 507697 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1295007 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2312848 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2643025 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 3096158 15675631 ~ 15685899 (+)
G71525 NA other downstream 4068815 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 8118350 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 9048976 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 9082176 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9515846 28302373 ~ 28304073 (+)

Expression


Co-expression Network