AMCG00014593


Basic Information

Item Value
gene id AMCG00014593
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18932137 ~ 18946921 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014593
GAGACATCGTCATTAGTTGGTTTACTAGACTCCAGTCTGACAGCAAACGAGCTTCAGCACCAGTGCACCTGCTTCACTTGTCaacatggacacacacaggggACGCAGATCCATCAACCAGAATAACTTCACACAGAGCAGAAAGTATCCTGGAAACAACGACATGAATTTGGCTGAAAATAACGAGGATCAAATCGCATACCAGGACAACCCGACGGCAGAACAACAGCCGCCTTCACCAAACCCCCAGCAGGCTCAGTACATGGGAGGATATTCCATGATAGCGCCCAATGAATCAAGGAGGAGTAAATTGCAGACAAGTGGAGCAGTATCAATTGAAGAGGCCAGACAAAAGCAAATGCTGGGTTTGCGACAATCCAAGTACCAGAGAAAGCTGAAACAAGAGGAGTTtgagagaaagaggaaagaagcagaagaagcaGAGATTCAGAAGAAAAAGGATATGCAGCGAGAAAAGGCTAAAGTGCATGCTTACAGAGAAGCTCaaaaagaggaggaagaagcccagctgacacaaaagaaagaagagcAAAGGACTAAGAGCAAACTCTTGgaggaaaagcaaaaaagagaagaagaagaaagaaagagagaactCCAAAggTTAACGCAGCCTTCTTGGATCGGATTCAAGGAAATGTACAGTCAGGTAGGAAGGAGCTTGTCTTTCCTGTTGGTGTGGCTGAAGGAAGAGCCCCATGTGCCAGTGCCCCACAGGATGCCCCTACATCCCCAGGGCCCGGCCTGGATTGGAATGAAGGAGAAGGGGGTCATGACCTTGAATGGACAGTGATGAAGCTTCTCAATAGGTTTCCAATGTATGAACGGACTTTCATAGAGGACATAGTGACTCAGTGCAATGGAGATTACAACCAAGTCTGCAGCCTACTtcagtaacaaaacaaatcctgtaATTGTCTGTTACTCCTGTAACACAGTTGAGTGAAAATATTAGCAATGGGATGGGGGTGTAGCTCAGCTAGTGAAAGCTCTTGCTATGCTTGGTTGGTGAATACATAATtaccatgtttattttaatttcattttggtTTGTGACTAAACCCATAAATAACTGAATCATTAGTCAAATAGATGtaattaatcataaatataataaacctGTGAACTGGAAAAAGTTATCTTTCTAAAATGACATCATGTCTGGTCTTATAGTTGATgttaataaagttaataatCTATtgttatatgtaatataaactCTAGTTAGCTGTCCTATAAATGTGGCTTCTCTCTGTGTGGTATAAAGATAAGTGAATATAAAGTGGTATAAAgtgaaatgagaaataaattatgGCAAACCTTAATTTAAACCTTGGCCTTTgcttaactgttttttttt

Function

GO: NA

KEGG:

id description
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014593 True 1381 mRNA 0.41 8 18932137 18946921

Neighbor

gene id symbol gene type direction distance location
AMCG00014590 vwa8 coding downstream 154529 18776776 ~ 18777608 (-)
AMCG00014589 vwa8,LOC107579031 coding downstream 165477 18720805 ~ 18766660 (-)
AMCG00014588 vwa8 coding downstream 222728 18696075 ~ 18709409 (-)
AMCG00014585 NA coding downstream 287467 18639812 ~ 18644670 (-)
AMCG00014579 mycbp2 coding downstream 374849 18489550 ~ 18557288 (-)
AMCG00014597 NA coding upstream 24515 18971436 ~ 18999017 (-)
AMCG00014601 tsc22d1,LOC107551985,LOC107713726,LOC107688650,LOC107748883 coding upstream 167446 19114367 ~ 19122826 (-)
AMCG00014602 tsc22d1,LOC107713726,LOC107551985,LOC107748883,LOC107576221 coding upstream 213008 19159929 ~ 19162787 (-)
AMCG00014600 NA coding upstream 227761 19174682 ~ 19184193 (-)
AMCG00014615 NA coding upstream 383967 19330888 ~ 19338660 (-)
G71179 NA non-coding downstream 53884 18874605 ~ 18878253 (-)
G71174 NA non-coding downstream 81026 18850724 ~ 18851111 (-)
G71160 NA non-coding downstream 244791 18686498 ~ 18687346 (-)
G71157 NA non-coding downstream 262482 18668801 ~ 18669655 (-)
G71133 NA non-coding downstream 267506 18664264 ~ 18664631 (-)
G71284 NA non-coding upstream 244464 19191385 ~ 19191632 (-)
G71290 NA non-coding upstream 265723 19212644 ~ 19214404 (-)
G71291 NA non-coding upstream 267693 19214614 ~ 19215246 (-)
G71292 NA non-coding upstream 269292 19216213 ~ 19217037 (-)
G71315 NA non-coding upstream 305653 19252574 ~ 19255934 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 910042 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 1310986 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 1469847 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 2194260 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5798386 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 254882 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 270801 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3279003 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8338499 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 8388774 27335695 ~ 27369527 (-)

Expression


Co-expression Network