AMCG00014605


Basic Information

Item Value
gene id AMCG00014605
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 19380431 ~ 19384319 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014605
ATGAAGATTTGTACGTGTGATACCTTCGCGGTGCTTTTTACTTTGTTGTGCATTGCGCAAAGTAAAACCACTAAATACATCACTTATGAAGAAGATGCTCCGGGAACAGAGATTGGAAACTTGGCGCAGGATCTGAAGATTGATCCAGCCGAGGATCCCCAGACCAGCTTTCGCTTCATGCAGAAGGGCAGCTCATCCTTGATTCACATGAGAGAGACGGACGGGCTGATCAGCACCGGCGAGAGGATTGACAGGGAGCAGCTATGCGGCCAGGCTCCACAGTGCCTGCTCACGTTTGACATCGTCACCTTTTCCAAGGAGAAGTTTCAACTCGTTCACCTGGAGGTGGAAGTGAAGGACATCAATGACAACTCGCCGCTGTTCCCACACAACGAAACATACATCGAGATTTCGGAGAACGCAGTTGTGGGAACTCGATTTCCTTTGGACATTGCCGTTGACCAGGATCACTACACCATAAGAGTAAGTGACGAGAACGACAATGCGCCTCTTTTCAGCAAATCGGTGTATGAAGTTTCCGTTCTGGAGAACAATATCCCAGGTTCATACATCACCACTGTAATAGCCCGTGATCTGGACCTGGGCGACAATGGCAAGGTATCCTATAAACTCATTGATGGAGAAGTAGCAGGGGGTTATCCGTTGTCCACCTATGTTTCTGTGCACCCACTTTCGGGCGCTTTATATGCGGTGAGGTCTTTTAATTATGAGTCAATTCAGCAAATCGAAGTGACCATCCAAGCCAGCGACAGTGGTTCCCCACAACGATTCAACACTGCTCGGATCAGAGTCAAAATAGTAGACCAAAACGACAATGCCCCTTTCATAGTATTCCCCCCTTTAAAGAATGGGTCGGCTGAGGTGCCCATACCTCACAACGCACCGGCTGGGTACCTGGTGCTCCAGGTCAAGGCGAGAGACTCAGACGAAGGGGTGAATCGAGAACTGTCCTTTCAAATAACAGAAGACCAGGAGATGCTGTTTTCTATCAATAAGGAAACTGGCGCCGTTTATCTAAAACATGGTTTGAACTTTGTCTACGGAGACATGCTGGAAGTCGAGATCGCAGTTAAGGACAACGGAAGACCGTCGTTGTCTTCCAGCGCTGTGGTTCGCTTTCTTGTTACAGAAATGAATCCAGTGGAAGATCAGATACTGCTTGTACTCCAGTCCAGTGATGAAGAGCACCCCGATTTGGACACTTCACTCATTGTGATAATCATGCTGGGTGGAGGCTGTGCTTTGCTACTGATCGCCATTGTAACTGTGGCTGTGTCTTGCAAAAACAGCAAAGGGAAGGACTACGGTATAAAGGaggacacaaaacacaaaatcttTGAAAGAAACCCCCTGGTCATGCACAGCTCACAGGACGCCTCTGTGTACATGGGATCCAGAATCATTGCCAACGATGGAGTTGGACGCCCAGGAGACAGCGATGCTTCCACCTGTCTGTACGAGGAGAGAAGCGGAGATGCAGAAACGAGAgtttacATGTCCAACAACACTTTCAGTCCAAAGCACTTCGAACCAGTGGCCCTGTGGCAAGGGGACAAGTACAGTTTACAGCTGAGTGGTATTGGGAACACCGATCAGCTCAGCACGAAGGATAGTGGTAAAGGAGACAGTGACTTCAACGACAGTGATTCTGACATCAGCGGGGACGGATCCAGGAAGATTCACAGCACCTTCCACCCACGGGCAAATGGTAACTTTCAGACTCGTCACTTTCATTCTACAAGCAATCGAGTTCCTGACCCCAGGGAGAGATACTGTGTGATCCCCACTCACAACACTTCAACTTTTGGGAAAGGATACACGATTGCTTTTTCTCAAGCGCCTGCCTACAATCAGTACGCCGCTTCATTGAAAGACTCCTGTTATCGGACCAACATCCCCAAAACAACAGGTTTGCTGCAGGCTATTCCCAGGACGGAAACGCTGCCACCGCAATTACGTCGCCCAAACCACGAACCAGTAACTCACAGCAATGGACCCGAACAAGCAAAGGATCCACTGAGTACAACAACAGCTGTATCCGAAGTTGCTACTTCGTTTTAA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014605 True 2082 mRNA 0.49 5 19380431 19384319

Neighbor

gene id symbol gene type direction distance location
AMCG00014611 LOC107384298,LOC104941757 coding upstream 49513 19319869 ~ 19330918 (+)
AMCG00014606 NA coding upstream 63176 19296416 ~ 19317255 (+)
AMCG00014609 ednrb,LOC108434743,LOC107658690,LOC107566659,LOC105911940 coding upstream 88681 19285333 ~ 19291750 (+)
AMCG00014608 cog3 coding upstream 127824 19237570 ~ 19252607 (+)
AMCG00014610 slc25a30,LOC105911955,LOC100698510,LOC104935787,LOC102198731 coding upstream 143642 19223781 ~ 19236789 (+)
AMCG00014617 NA coding downstream 458833 19843152 ~ 19844042 (+)
AMCG00014618 NA coding downstream 575270 19959589 ~ 20021694 (+)
AMCG00014619 NA coding downstream 640202 20024521 ~ 20073070 (+)
AMCG00014624 NA coding downstream 1262020 20646339 ~ 20667180 (+)
AMCG00014632 nfip2,LOC107750051 coding downstream 2863462 22247781 ~ 22264000 (+)
G71283 tpt1,LOC106582181 non-coding upstream 157512 19218317 ~ 19222919 (+)
G71237 NA non-coding upstream 332259 19047958 ~ 19048172 (+)
G71183 NA non-coding upstream 478270 18901225 ~ 18902161 (+)
G71136 NA non-coding upstream 687798 18688548 ~ 18692633 (+)
G71038 NA non-coding upstream 902403 18477043 ~ 18478028 (+)
G71362 NA non-coding downstream 540583 19924902 ~ 19925198 (+)
G71378 NA non-coding downstream 802295 20186614 ~ 20186966 (+)
G71414 NA non-coding downstream 1540249 20924568 ~ 20924837 (+)
G71424 NA non-coding downstream 1927271 21311590 ~ 21312022 (+)
G71452 NA non-coding downstream 2735264 22119583 ~ 22122533 (+)
G71004 NA other upstream 1106071 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1893381 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2911222 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 3241399 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 3694532 15675631 ~ 15685899 (+)
G71525 NA other downstream 3471023 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 7520558 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 8451184 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 8484384 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 8918054 28302373 ~ 28304073 (+)

Expression


Co-expression Network