AMCG00014615


Basic Information

Item Value
gene id AMCG00014615
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 19330888 ~ 19338660 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014615
GGGAAGTGCAGAAAGTGGACTGGTGGACAATCTGACTCCATAAGTTCATAGGACACCATGGCAGAGACTTCGGAGAAAGTCCCAATTGCTCTGGCAGGACCAGAAGATGTGGAACAATGTTTACCACCTGCGTACACTGCAGTCTCGGTAAAGCCCCCCAACAGCGGCCGTCTTGTGAAAGTGGGAGCTGCCGTGCTTATTGTGGGAGCCGCTCTTTTGCTTTTTGGAGCAATCGGCGCCTTTTACTTTTGGAAAGTGAATGACAAACATGTGTACAATGTTCACTATAGTATGAGCATCAATGGAAAAGTCGAGGAGGGATCAATGGAAATTGATACCGGAAATAACCTGGAGACATTTAGAACCGGAAGCGGGAGTGACGAGGCTGTGGAAGTTCATGATTTTCACATTGGAATTACAGGAATTCGTTTCTCCAGTGGAgagaaatgttatattaaagCACAAGCCAAAGCCCACCTGCCTAATGTGGAGAGCTTGAACAAGGAGACATTGACATTTGACCTGGAAGACGAAATCATGCCAGCTAAGTTTGATGAGGAGTCTCTCATATGGGTGGCTGCAGACCAGCCAGTGAAAGATAACAGCTTCCTGAGCACTAAAATCTTGGACCTCTGTGGCGATCTTCCAATTTTCTGGCTTCGTCCCACATATCCTAAAGATGGTCAGAGGAAGAAAAGGGAAGCTCCGCGTGAAAGACGTCAGTCAGCCGATGCCGAGCGAGTGAACACTATCGGTGTGCCTCGAAACAATGTTACCTCAAGGAGAGTCGCAGGTGAAGAGGAGGAGCCAACCACCGCTTTCAACCCAGAAAATCCCTACCACCGAAGCCAAGAAGATGAAGGAGCCATGACATTCGACCCCATGCTGGACCACAAAGGAATCTGCTGTATCGAGTGCAGACGCAGCTACACACACTGCCAGCGGATATGCGAGCCCCTCGGTGGCTACTGGCCCTGGCCGTACGACCACAAAGGATGCCAAGTTGCCTGTAGGATCATTATGCCGTGCCGCTGGTGGGTTGGGCGCATGTTAGGGATTTTGTAGACCTGCAATTGATGACTAAAACCATAGGAAATTTAGCTCTGACCCAAGCTGAAGAAGCCCTTTAAATCCACCTTACATTAAAcacttttctgaaatgtatttcaatgccaaataatgaaaaaatactttttctggatgtaaataaatataataaagtgcTAACTATATTGGTGTTAAGCCATTGCAAAATTGTGTTacttctgaaactgaaaaggtAGAAAGCATGTCTTTTAGTGTAGTACATGTTACATGAGGACTAAATCGTAATCATGAAACAACCGATATCCAGTTTTACTTGTTTTGCTCTTGATGGTGTAAGCATTATAGAAATTCTCTTCACTTTTCTGcacactttgttttttcctgtaaacatCAATCTGTAATTCCCCACATGTGGTTTGTGATGAACTTGTTAATAAACCCAAACTTTGTTTTCCCGGCTTTCCTTTCCATTCACGGATTTGTTCATGGTCTTTAGATCTAACCACCTtcaatttacatacatttttctggttaattaaaaacaaagtgcagaCCAATTGTAATGTCCAGTAAGTATGTTTAAAATACCGATTAgacatactttaaaatattttcttgttttgtagaCTGCAGTTCAATTCTGTAGATTTCAATGCTTAATGTATCATGAAAAAAATCTATAGCAATGTGACAAGCAACA

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014615 True 1747 mRNA 0.43 7 19330888 19338660

Neighbor

gene id symbol gene type direction distance location
AMCG00014600 NA coding downstream 146695 19174682 ~ 19184193 (-)
AMCG00014602 tsc22d1,LOC107713726,LOC107551985,LOC107748883,LOC107576221 coding downstream 168101 19159929 ~ 19162787 (-)
AMCG00014601 tsc22d1,LOC107551985,LOC107713726,LOC107688650,LOC107748883 coding downstream 208062 19114367 ~ 19122826 (-)
AMCG00014597 NA coding downstream 331871 18971436 ~ 18999017 (-)
AMCG00014593 NA coding downstream 383967 18932137 ~ 18946921 (-)
AMCG00014614 NA coding upstream 3471 19342131 ~ 19345670 (-)
AMCG00014616 NA coding upstream 47955 19386615 ~ 19390852 (-)
AMCG00014623 LOC108428456 coding upstream 1020486 20359146 ~ 20401033 (-)
AMCG00014621 NA coding upstream 1113524 20452184 ~ 20458681 (-)
AMCG00014620 diaph3,LOC102302025,LOC102782473 coding upstream 1137689 20476349 ~ 20479063 (-)
G71315 NA non-coding downstream 74954 19252574 ~ 19255934 (-)
G71292 NA non-coding downstream 113851 19216213 ~ 19217037 (-)
G71291 NA non-coding downstream 115642 19214614 ~ 19215246 (-)
G71290 NA non-coding downstream 116484 19212644 ~ 19214404 (-)
G71284 NA non-coding downstream 139256 19191385 ~ 19191632 (-)
G71360 NA non-coding upstream 454139 19792799 ~ 19880231 (-)
G71371 NA non-coding upstream 734365 20073025 ~ 20078009 (-)
G71379 NA non-coding upstream 847969 20186629 ~ 20186968 (-)
G71451 NA non-coding upstream 2659262 21997922 ~ 21998188 (-)
G71461 NA non-coding upstream 2882410 22221070 ~ 22221467 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 105658 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 127321 19201803 ~ 19203567 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 1308793 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 1709737 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 1868598 17446868 ~ 17462290 (-)
AMCG00014630 LOC107672672 other upstream 2887264 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 7946760 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 7997035 27335695 ~ 27369527 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 8991079 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 10050630 29389290 ~ 29398305 (-)

Expression


Co-expression Network