AMCG00014617


Basic Information

Item Value
gene id AMCG00014617
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 19843152 ~ 19844042 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014617
ATGGCAGACTGCATTGATCAAATTCTGGAACAAGAAGACGCACTTAAACTCCACTTCAATTTAGCGTCAAATTCAGAACATTGCTATTCTGCATGGATTTTGAGTGAGATGTACAATGACAAAGCCAATATCATCTACAAGCACTTTCTCAAACCCATCTTAATGGAGATAAAAACTGTGAACAATTACTTTCAGCTAGAAACAGGTGACTCGCTGGGTGTGTTTAAGGATCTTGAGAGATTGTACATGTCGGCATTAAGAAGATTAGTTAAGCCAAGCGTTTTGCGCATGAACAGTAACAGTCAACAAAAGGCGCTGGACCTCAAATCCTCCAGCATTTACCTGTCAGCCAGGATGTGGATCTGGGGACCACATTCCAAAAACAACTGGAAGCCCGAAGTCAGTGATGTGTACCATCAACAAGCCAAGCGTAACAGATTTGTCATGGAATTTTTTTCAAACTCGATCGACAGCCTAGAGACTCAGTGGAGGCTGGTAGCATCAGCAGGCTTTTCGAGTGATCAGACCATTGATGCTTTCTGGATGGAAGTTGAAGCGTTCAAAGATGCTGGAGGAAAAGAGTGTTTTGAGGAATTGGGTGCCATAAAATTGCTGACTCTGCCCATATCCAAGACGTATGTGGAAAGAGCATTTTCTCAGGTGGCACTGCTGAAAGATGAAATGAGAAATCTCATCCGACTACCGCTCCTTTCCAGTCTCATTACAGGCCTGAGCAGGAATGGGTGGTCATCCGCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014617 True 759 mRNA 0.44 2 19843152 19844042

Neighbor

gene id symbol gene type direction distance location
AMCG00014605 NA coding upstream 458833 19380431 ~ 19384319 (+)
AMCG00014611 LOC107384298,LOC104941757 coding upstream 512234 19319869 ~ 19330918 (+)
AMCG00014606 NA coding upstream 525897 19296416 ~ 19317255 (+)
AMCG00014609 ednrb,LOC108434743,LOC107658690,LOC107566659,LOC105911940 coding upstream 551402 19285333 ~ 19291750 (+)
AMCG00014608 cog3 coding upstream 590545 19237570 ~ 19252607 (+)
AMCG00014618 NA coding downstream 115547 19959589 ~ 20021694 (+)
AMCG00014619 NA coding downstream 180479 20024521 ~ 20073070 (+)
AMCG00014624 NA coding downstream 802297 20646339 ~ 20667180 (+)
AMCG00014632 nfip2,LOC107750051 coding downstream 2403739 22247781 ~ 22264000 (+)
AMCG00014635 NA coding downstream 4538725 24382767 ~ 24385815 (+)
G71283 tpt1,LOC106582181 non-coding upstream 620233 19218317 ~ 19222919 (+)
G71237 NA non-coding upstream 794980 19047958 ~ 19048172 (+)
G71183 NA non-coding upstream 940991 18901225 ~ 18902161 (+)
G71136 NA non-coding upstream 1150519 18688548 ~ 18692633 (+)
G71038 NA non-coding upstream 1365124 18477043 ~ 18478028 (+)
G71362 NA non-coding downstream 80860 19924902 ~ 19925198 (+)
G71378 NA non-coding downstream 342572 20186614 ~ 20186966 (+)
G71414 NA non-coding downstream 1080526 20924568 ~ 20924837 (+)
G71424 NA non-coding downstream 1467548 21311590 ~ 21312022 (+)
G71452 NA non-coding downstream 2275541 22119583 ~ 22122533 (+)
G71004 NA other upstream 1568792 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 2356102 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 3373943 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 3704120 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 4157253 15675631 ~ 15685899 (+)
G71525 NA other downstream 3011300 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 7060835 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 7991461 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 8024661 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 8458331 28302373 ~ 28304073 (+)

Expression


Co-expression Network